RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 HTR2CP28335 458 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 TACR3P29371 465 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 FUT7Q11130 342 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 DHRS2Q13268 280 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 ATPAF1Q5TC12 328 aaPredicted RBP11.66□□□□□ -0.54
DDX11-223ENST00000542838 FNDC7Q5VTL7 733 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 TMEM225Q6GV28 225 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 LIN54Q6MZP7 749 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 POMZP3Q6PJE2 187 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 MOB3CQ70IA8 216 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 NDUFAF7Q7L592 441 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 TAF8Q7Z7C8 310 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 PARGQ86W56 976 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 AVL9Q8NBF6 648 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 OR5M8Q8NGP6 311 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 OR10Z1Q8NGY1 313 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 ZNF75AQ96N20 296 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 VRK1Q99986 396 aaPredicted RBP11.66□□□□□ -0.54
DDX11-223ENST00000542838 KLHDC3Q9BQ90 382 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 ZNF471Q9BX82 626 aaPredicted RBP11.66□□□□□ -0.54
DDX11-223ENST00000542838 ZMAT3Q9HA38 289 aaKnown RBP11.66□□□□□ -0.54
DDX11-223ENST00000542838 BARX1Q9HBU1 254 aaPredicted RBP11.66□□□□□ -0.54
DDX11-223ENST00000542838 UBQLN4Q9NRR5 601 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 DOCK8Q8NF50 2099 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 A0A1W2PQF6 199 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 XKRYO14609 159 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 ZNF264O43296 627 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 CYB5AP00167 134 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 CSN2P05814 226 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 LIPCP11150 499 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 VEGFBP49765 207 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 IGLV3-21P80748 117 aaPredicted RBP11.66□□□□□ -0.54
DDX11-223ENST00000542838 CCINQ13939 588 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 ATXN7L3Q14CW9 347 aaPredicted RBP11.66□□□□□ -0.54
DDX11-223ENST00000542838 TOMM20Q15388 145 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 GLYATL3Q5SZD4 288 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 C11orf87Q6NUJ2 197 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 ARMC6Q6NXE6 501 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 FDX2Q6P4F2 183 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 BPIFB2Q8N4F0 458 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 ARHGEF39Q8N4T4 335 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 ZNF615Q8N8J6 731 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 TMEM185AQ8NFB2 350 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 SLC37A2Q8TED4 501 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 SLC25A28Q96A46 364 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 SEC22AQ96IW7 307 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 RPP25Q9BUL9 199 aaKnown RBP11.66□□□□□ -0.54
DDX11-223ENST00000542838 TCEAL2Q9H3H9 227 aaPredicted RBP11.66□□□□□ -0.54
DDX11-223ENST00000542838 MYEF2Q9P2K5 600 aaKnown RBP11.66□□□□□ -0.54
DDX11-223ENST00000542838 CGGBP1Q9UFW8 167 aaPredicted RBP11.66□□□□□ -0.54
DDX11-223ENST00000542838 TNFSF18Q9UNG2 199 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 NDUFA2O43678 99 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 OR6A2O95222 327 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 CNR1P21554 472 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 UBE2IP63279 158 aaKnown RBP11.66□□□□□ -0.54
DDX11-223ENST00000542838 ZNF679Q8IYX0 411 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 RNF128Q8TEB7 428 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 SLC41A2Q96JW4 573 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 GABRG3Q99928 467 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 NKX6-2Q9C056 277 aaPredicted RBP11.66□□□□□ -0.54
DDX11-223ENST00000542838 TAS2R4Q9NYW5 299 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 CKLFQ9UBR5 152 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 MSRAQ9UJ68 235 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 CLDN16Q9Y5I7 305 aa11.66□□□□□ -0.54
DDX11-223ENST00000542838 A0A1B0GTI1 187 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 ZNF736B4DX44 427 aaPredicted RBP11.65□□□□□ -0.54
DDX11-223ENST00000542838 BCL2L11O43521 198 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 OR2F2O95006 317 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 KLF8O95600 359 aaPredicted RBP11.65□□□□□ -0.54
DDX11-223ENST00000542838 PLGP00747 810 aaPredicted RBP11.65□□□□□ -0.54
DDX11-223ENST00000542838 HLA-AP01891 365 aaKnown RBP11.65□□□□□ -0.54
DDX11-223ENST00000542838 SPARCP09486 303 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 ZNF735P0CB33 412 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 ZNF28P17035 718 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 GPM6BQ13491 265 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 OR2F1Q13607 317 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 METTL27Q8N6F8 245 aaPredicted RBP11.65□□□□□ -0.54
DDX11-223ENST00000542838 BOLLQ8N9W6 283 aaKnown RBP11.65□□□□□ -0.54
DDX11-223ENST00000542838 ZBTB8AQ96BR9 441 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 CMKLR1Q99788 373 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 SCPEP1Q9HB40 452 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 PRODH2Q9UF12 536 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 CACNA1IQ9P0X4 2223 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 MPTX1A8MV57 137 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 CD2P06729 351 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 CELA2BP08218 269 aaPredicted RBP11.65□□□□□ -0.54
DDX11-223ENST00000542838 DLSTP36957 453 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 TFF2Q03403 129 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 ZNF345Q14585 488 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 ZNF542PQ5EBM4 170 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 PDSS1Q5T2R2 415 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 PARM1Q6UWI2 310 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 OR2W3Q7Z3T1 314 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 ASB5Q8WWX0 329 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 HERVK_113Q902F9 699 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 SEMA6CQ9H3T2 930 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 MYOZ1Q9NP98 299 aaPredicted RBP11.65□□□□□ -0.54
DDX11-223ENST00000542838 B9D1Q9UPM9 204 aa11.65□□□□□ -0.54
DDX11-223ENST00000542838 MRPS18BQ9Y676 258 aaKnown RBP11.65□□□□□ -0.54
DDX11-223ENST00000542838 DCDC2BA2VCK2 349 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms