RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 SEC14L2O76054 403 aa20.26■□□□□ 0.83
HOMER3-205ENST00000542541 ZNF823P16415 610 aa20.26■□□□□ 0.83
HOMER3-205ENST00000542541 LSM6P62312 80 aaKnown RBP20.26■□□□□ 0.83
HOMER3-205ENST00000542541 HAO2Q9NYQ3 351 aa20.26■□□□□ 0.83
HOMER3-205ENST00000542541 AASSQ9UDR5 926 aa20.26■□□□□ 0.83
HOMER3-205ENST00000542541 GCN1Q92616 2671 aaKnown RBP20.26■□□□□ 0.83
HOMER3-205ENST00000542541 A0A096LPE4 126 aa20.25■□□□□ 0.83
HOMER3-205ENST00000542541 A0A1W2PPZ6 126 aa20.25■□□□□ 0.83
HOMER3-205ENST00000542541 GAAP10253 952 aa20.25■□□□□ 0.83
HOMER3-205ENST00000542541 CDK5R2Q13319 367 aa20.25■□□□□ 0.83
HOMER3-205ENST00000542541 TSC22D1Q15714 1073 aa20.25■□□□□ 0.83
HOMER3-205ENST00000542541 TBRG1Q3YBR2 411 aa20.25■□□□□ 0.83
HOMER3-205ENST00000542541 KRT80Q6KB66 452 aa20.25■□□□□ 0.83
HOMER3-205ENST00000542541 KLHL24Q6TFL4 600 aa20.25■□□□□ 0.83
HOMER3-205ENST00000542541 DPPA2Q7Z7J5 298 aa20.25■□□□□ 0.83
HOMER3-205ENST00000542541 CNIH3Q8TBE1 160 aa20.25■□□□□ 0.83
HOMER3-205ENST00000542541 FBLIM1Q8WUP2 373 aa20.25■□□□□ 0.83
HOMER3-205ENST00000542541 APH1BQ8WW43 257 aa20.25■□□□□ 0.83
HOMER3-205ENST00000542541 C11orf40Q8WZ69 217 aa20.25■□□□□ 0.83
HOMER3-205ENST00000542541 NABP1Q96AH0 204 aa20.25■□□□□ 0.83
HOMER3-205ENST00000542541 ZMYND19Q96E35 227 aaPredicted RBP20.25■□□□□ 0.83
HOMER3-205ENST00000542541 CNBD2Q96M20 576 aa20.25■□□□□ 0.83
HOMER3-205ENST00000542541 WACQ9BTA9 647 aa20.25■□□□□ 0.83
HOMER3-205ENST00000542541 OBP2BQ9NPH6 170 aa20.25■□□□□ 0.83
HOMER3-205ENST00000542541 KCNG2Q9UJ96 466 aa20.25■□□□□ 0.83
HOMER3-205ENST00000542541 C12orf71A8MTZ7 269 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 TMCC2O75069 709 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 WBP4O75554 376 aaKnown RBP20.24■□□□□ 0.83
HOMER3-205ENST00000542541 MPZL1O95297 269 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 TFP02787 698 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 PPP3CBP16298 524 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 UBE2NP61088 152 aaKnown RBP20.24■□□□□ 0.83
HOMER3-205ENST00000542541 SORDQ00796 357 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 SSX8Q7RTT4 187 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 ZNF511Q8NB15 262 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 NANOS1Q8WY41 292 aaKnown RBP20.24■□□□□ 0.83
HOMER3-205ENST00000542541 CDADC1Q9BWV3 514 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 ACTR6Q9GZN1 396 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 RPL36Q9Y3U8 105 aaKnown RBP20.24■□□□□ 0.83
HOMER3-205ENST00000542541 CLEC18AA5D8T8 446 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 CCDC182A6NF36 153 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 TVP23AA6NH52 213 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 OR5H1A6NKK0 313 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 GPANK1O95872 356 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 CST2P09228 141 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 PAX7P23759 505 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 PCBD1P61457 104 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 ADAM8P78325 824 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 TFF3Q07654 80 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 SRSF1Q07955 248 aaKnown RBP eCLIP20.24■□□□□ 0.83
HOMER3-205ENST00000542541 POU4F2Q12837 409 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 SLC36A2Q495M3 483 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 HIKESHIQ53FT3 197 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 TIMM23BQ5SRD1 257 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 CLEC18BQ6UXF7 455 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 SLC16A14Q7RTX9 510 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 SKA3Q8IX90 412 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 LRRC18Q8N456 261 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 CLEC18CQ8NCF0 446 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 S100PBPQ96BU1 408 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 INTS14Q96SY0 518 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 SH3GL3Q99963 347 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 MARCH7Q9H992 704 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 SLC17A5Q9NRA2 495 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 POLR1DQ9Y2S0 133 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 LRRC42Q9Y546 428 aa20.24■□□□□ 0.83
HOMER3-205ENST00000542541 ATP6V1E1P36543 226 aa20.23■□□□□ 0.83
HOMER3-205ENST00000542541 PEX19P40855 299 aa20.23■□□□□ 0.83
HOMER3-205ENST00000542541 MTNR1AP48039 350 aa20.23■□□□□ 0.83
HOMER3-205ENST00000542541 CSNK2BP67870 215 aa20.23■□□□□ 0.83
HOMER3-205ENST00000542541 MED21Q13503 144 aa20.23■□□□□ 0.83
HOMER3-205ENST00000542541 GGTLC2Q14390 218 aa20.23■□□□□ 0.83
HOMER3-205ENST00000542541 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.23■□□□□ 0.83
HOMER3-205ENST00000542541 SYT9Q86SS6 491 aa20.23■□□□□ 0.83
HOMER3-205ENST00000542541 HSD17B8Q92506 261 aa20.23■□□□□ 0.83
HOMER3-205ENST00000542541 HTRA1Q92743 480 aa20.23■□□□□ 0.83
HOMER3-205ENST00000542541 MUCL1Q96DR8 90 aa20.23■□□□□ 0.83
HOMER3-205ENST00000542541 EMC7Q9NPA0 242 aa20.23■□□□□ 0.83
HOMER3-205ENST00000542541 MRPL22Q9NWU5 206 aaKnown RBP20.23■□□□□ 0.83
HOMER3-205ENST00000542541 AMDHD2Q9Y303 409 aa20.23■□□□□ 0.83
HOMER3-205ENST00000542541 COMMD3-BMI1R4GMX3 469 aa20.23■□□□□ 0.83
HOMER3-205ENST00000542541 ARPC4-TTLL3A0A0A6YYG9 625 aa20.22■□□□□ 0.83
HOMER3-205ENST00000542541 WNT11O96014 354 aa20.22■□□□□ 0.83
HOMER3-205ENST00000542541 SCG5P05408 212 aa20.22■□□□□ 0.83
HOMER3-205ENST00000542541 CAPZA2P47755 286 aa20.22■□□□□ 0.83
HOMER3-205ENST00000542541 ENTPD1P49961 510 aa20.22■□□□□ 0.83
HOMER3-205ENST00000542541 MEP1BQ16820 701 aa20.22■□□□□ 0.83
HOMER3-205ENST00000542541 TEX30Q5JUR7 227 aa20.22■□□□□ 0.83
HOMER3-205ENST00000542541 B3GLCTQ6Y288 498 aa20.22■□□□□ 0.83
HOMER3-205ENST00000542541 ERI1Q8IV48 349 aaKnown RBP20.22■□□□□ 0.83
HOMER3-205ENST00000542541 ZNF416Q9BWM5 594 aa20.22■□□□□ 0.83
HOMER3-205ENST00000542541 MOV10Q9HCE1 1003 aaKnown RBP20.22■□□□□ 0.83
HOMER3-205ENST00000542541 NDRG3Q9UGV2 375 aa20.22■□□□□ 0.83
HOMER3-205ENST00000542541 USP9XQ93008 2570 aaPredicted RBP20.22■□□□□ 0.83
HOMER3-205ENST00000542541 ZNF593O00488 134 aaPredicted RBP20.21■□□□□ 0.83
HOMER3-205ENST00000542541 UBL3O95164 117 aa20.21■□□□□ 0.83
HOMER3-205ENST00000542541 UGT2A3Q6UWM9 527 aa20.21■□□□□ 0.83
HOMER3-205ENST00000542541 SHFQ7M4L6 423 aa20.21■□□□□ 0.83
HOMER3-205ENST00000542541 TIGD4Q8IY51 512 aa20.21■□□□□ 0.83
HOMER3-205ENST00000542541 OR2AJ1Q8NGZ0 328 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms