RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 SYT4Q9H2B2 425 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 GSX1Q9H4S2 264 aaPredicted RBP8.4□□□□□ -1.06
YBX3-212ENST00000542002 RNF121Q9H920 327 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 MOV10Q9HCE1 1003 aaKnown RBP8.4□□□□□ -1.06
YBX3-212ENST00000542002 EMC7Q9NPA0 242 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 FAIMQ9NVQ4 179 aa8.4□□□□□ -1.06
YBX3-212ENST00000542002 COA3Q9Y2R0 106 aaPredicted RBP8.4□□□□□ -1.06
YBX3-212ENST00000542002 SAMHD1Q9Y3Z3 626 aaKnown RBP8.4□□□□□ -1.06
YBX3-212ENST00000542002 DSCAMO60469 2012 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 A0A1W2PPL8 197 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 OR6C68A6NDL8 312 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 BHLHE40O14503 412 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 ARPC3O15145 178 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 AHCYL1O43865 530 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 TMCC2O75069 709 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 LY6HO94772 140 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 FARS2O95363 451 aaKnown RBP8.39□□□□□ -1.07
YBX3-212ENST00000542002 RAB36O95755 333 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 CST1P01037 141 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 APEHP13798 732 aaKnown RBP8.39□□□□□ -1.07
YBX3-212ENST00000542002 PRKACGP22612 351 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 APEX1P27695 318 aaKnown RBP8.39□□□□□ -1.07
YBX3-212ENST00000542002 IFNGR2P38484 337 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 DAG1Q14118 895 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 FLOT2Q14254 428 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 SLC36A2Q495M3 483 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 PABPC1L2AQ5JQF8 200 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 CLEC12AQ5QGZ9 265 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 SLC35F1Q5T1Q4 408 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 SPATA24Q86W54 205 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 OR6V1Q8N148 313 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 NPEPL1Q8NDH3 523 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 SLC30A7Q8NEW0 376 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 IL17RDQ8NFM7 739 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 OR4K13Q8NH42 304 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 NANOS1Q8WY41 292 aaKnown RBP8.39□□□□□ -1.07
YBX3-212ENST00000542002 UTP4Q969X6 686 aaKnown RBP8.39□□□□□ -1.07
YBX3-212ENST00000542002 FEVQ99581 238 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 KCNS3Q9BQ31 491 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 IFT27Q9BW83 186 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 REEP1Q9H902 201 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 NTN4Q9HB63 628 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 SRA1Q9HD15 236 aaKnown RBP8.39□□□□□ -1.07
YBX3-212ENST00000542002 KRCC1Q9NPI7 259 aaPredicted RBP8.39□□□□□ -1.07
YBX3-212ENST00000542002 POLE4Q9NR33 117 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 IL20Q9NYY1 176 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 REV1Q9UBZ9 1251 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 FZR1Q9UM11 496 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 B9D1Q9UPM9 204 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 USF3Q68DE3 2245 aa8.39□□□□□ -1.07
YBX3-212ENST00000542002 IGLV1-36A0A0B4J1U3 117 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 FAM171A2A8MVW0 826 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 XKRYO14609 159 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 FKBP6O75344 327 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 CST2P09228 141 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 SLC6A6P31641 620 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 WNT5AP41221 380 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 RPS6KA3P51812 740 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 ERVS71-1P61550 626 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 SNTB2Q13425 540 aaKnown RBP8.38□□□□□ -1.07
YBX3-212ENST00000542002 TNK1Q13470 666 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 CCNIQ14094 377 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 EFNB3Q15768 340 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 MEP1BQ16820 701 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 ZNF774Q6NX45 483 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 TMEM53Q6P2H8 277 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 LEG1Q6P5S2 330 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 RASSF6Q6ZTQ3 369 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 ASRGL1Q7L266 308 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 SVOPLQ8N434 492 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 LINC00471Q8N535 108 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 OR52E2Q8NGJ4 325 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 OR4Q3Q8NH05 313 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 FNDC8Q8TC99 324 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 C11orf40Q8WZ69 217 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 TRMT61AQ96FX7 289 aaKnown RBP8.38□□□□□ -1.07
YBX3-212ENST00000542002 POM121L2Q96KW2 1035 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 DGCR6LQ9BY27 220 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 MRPL37Q9BZE1 423 aaKnown RBP8.38□□□□□ -1.07
YBX3-212ENST00000542002 OR2H1Q9GZK4 316 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 LRMDAQ9H2I8 198 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 FN3KQ9H479 309 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 PLK3Q9H4B4 646 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 RERGLQ9H628 205 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 ZNF442Q9H7R0 627 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 MYEF2Q9P2K5 600 aaKnown RBP8.38□□□□□ -1.07
YBX3-212ENST00000542002 TIMM10BQ9Y5J6 103 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 CDH10Q9Y6N8 788 aa8.38□□□□□ -1.07
YBX3-212ENST00000542002 B9A039 149 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 H7C1Q1 480 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 H7C417 338 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 SSX4O60224 188 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 KHDRBS3O75525 346 aaKnown RBP8.37□□□□□ -1.07
YBX3-212ENST00000542002 TIPRLO75663 272 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 ATP5HO75947 161 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 SOX14O95416 240 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 CLPTM1O96005 669 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 TFP02787 698 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 FAM157BP0CG42 384 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 GAAP10253 952 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms