RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 ZNF764Q96H86 408 aaPredicted RBP8.34□□□□□ -1.07
CHFR-220ENST00000541817 PLEKHA8Q96JA3 519 aa8.34□□□□□ -1.07
CHFR-220ENST00000541817 ZNF607Q96SK3 696 aa8.34□□□□□ -1.07
CHFR-220ENST00000541817 COPS4Q9BT78 406 aa8.34□□□□□ -1.07
CHFR-220ENST00000541817 WDR12Q9GZL7 423 aaKnown RBP8.34□□□□□ -1.07
CHFR-220ENST00000541817 QRSL1Q9H0R6 528 aaKnown RBP8.34□□□□□ -1.07
CHFR-220ENST00000541817 BEX1Q9HBH7 125 aa8.34□□□□□ -1.07
CHFR-220ENST00000541817 A4GALTQ9NPC4 353 aa8.34□□□□□ -1.07
CHFR-220ENST00000541817 EQTNQ9NQ60 294 aa8.34□□□□□ -1.07
CHFR-220ENST00000541817 TBCCD1Q9NVR7 557 aa8.34□□□□□ -1.07
CHFR-220ENST00000541817 PAK1IP1Q9NWT1 392 aaPredicted RBP8.34□□□□□ -1.07
CHFR-220ENST00000541817 IMPAD1Q9NX62 359 aa8.34□□□□□ -1.07
CHFR-220ENST00000541817 hCG_2014768A0A024R1R8 64 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 ARRDC5A6NEK1 342 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 GJE1A6NN92 205 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 ZNF716A6NP11 495 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 E9PQ18 207 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 J3QLI3 93 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 CDC14BO60729 498 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 COQ9O75208 318 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 MRPL33O75394 65 aaKnown RBP8.33□□□□□ -1.08
CHFR-220ENST00000541817 SERPINB7O75635 380 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 NCR1O76036 304 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 GABARAPO95166 117 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 CD247P20963 164 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 ACHEP22303 614 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 NTSP30990 170 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 EIF1P41567 113 aaKnown RBP8.33□□□□□ -1.08
CHFR-220ENST00000541817 ALDH3B1P43353 468 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 MAGEA8P43361 318 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 OR1E2P47887 323 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 HMGA2P52926 109 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 CRYBA2P53672 197 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 PSMD4P55036 377 aaKnown RBP8.33□□□□□ -1.08
CHFR-220ENST00000541817 CDC42P60953 191 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 ZNF117Q03924 483 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.33□□□□□ -1.08
CHFR-220ENST00000541817 GNA13Q14344 377 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 MSMPQ1L6U9 139 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 ARMCX4Q5H9R4 360 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 SAMD5Q5TGI4 173 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 TSPO2Q5TGU0 170 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 CBLN3Q6UW01 205 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 Q6ZNX1 250 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 SLC16A12Q6ZSM3 486 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 AHSA2Q719I0 299 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 CCDC103Q8IW40 242 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 ENTHD1Q8IYW4 607 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 STX19Q8N4C7 294 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 OR52J3Q8NH60 311 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 OTUB1Q96FW1 271 aaPredicted RBP8.33□□□□□ -1.08
CHFR-220ENST00000541817 SLC35G5Q96KT7 338 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 KATNB1Q9BVA0 655 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 SPATA5L1Q9BVQ7 753 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 HMG20AQ9NP66 347 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 ACOT13Q9NPJ3 140 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 GPATCH2Q9NW75 528 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 AURKAIP1Q9NWT8 199 aaPredicted RBP8.33□□□□□ -1.08
CHFR-220ENST00000541817 CLN6Q9NWW5 311 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 GAR1Q9NY12 217 aaKnown RBP8.33□□□□□ -1.08
CHFR-220ENST00000541817 EMC3Q9P0I2 261 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 MALT1Q9UDY8 824 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 TESQ9UGI8 421 aaKnown RBP8.33□□□□□ -1.08
CHFR-220ENST00000541817 KLHL21Q9UJP4 597 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 MRTO4Q9UKD2 239 aaKnown RBP8.33□□□□□ -1.08
CHFR-220ENST00000541817 NUP50Q9UKX7 468 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 SH3GLB1Q9Y371 365 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 PLXNB1O43157 2135 aa8.33□□□□□ -1.08
CHFR-220ENST00000541817 OR6C65A6NJZ3 312 aa8.32□□□□□ -1.08
CHFR-220ENST00000541817 CLDN24A6NM45 220 aa8.32□□□□□ -1.08
CHFR-220ENST00000541817 TMEM229AB2RXF0 380 aa8.32□□□□□ -1.08
CHFR-220ENST00000541817 CLDN25C9JDP6 229 aa8.32□□□□□ -1.08
CHFR-220ENST00000541817 WBP4O75554 376 aaKnown RBP8.32□□□□□ -1.08
CHFR-220ENST00000541817 BCHEP06276 602 aa8.32□□□□□ -1.08
CHFR-220ENST00000541817 CDK1P06493 297 aa8.32□□□□□ -1.08
CHFR-220ENST00000541817 TNFRSF1BP20333 461 aa8.32□□□□□ -1.08
CHFR-220ENST00000541817 RANBP1P43487 201 aa8.32□□□□□ -1.08
CHFR-220ENST00000541817 CCT3P49368 545 aaKnown RBP8.32□□□□□ -1.08
CHFR-220ENST00000541817 DIO1P49895 249 aa8.32□□□□□ -1.08
CHFR-220ENST00000541817 BMXP51813 675 aa8.32□□□□□ -1.08
CHFR-220ENST00000541817 HSPB3Q12988 150 aa8.32□□□□□ -1.08
CHFR-220ENST00000541817 HLXQ14774 488 aaPredicted RBP8.32□□□□□ -1.08
CHFR-220ENST00000541817 SPCS2Q15005 226 aa8.32□□□□□ -1.08
CHFR-220ENST00000541817 SMN1Q16637 294 aaKnown RBP8.32□□□□□ -1.08
CHFR-220ENST00000541817 ALKBH6Q3KRA9 238 aa8.32□□□□□ -1.08
CHFR-220ENST00000541817 KPRPQ5T749 579 aaPredicted RBP8.32□□□□□ -1.08
CHFR-220ENST00000541817 UBE2UQ5VVX9 321 aa8.32□□□□□ -1.08
CHFR-220ENST00000541817 RUSC1-AS1Q66K80 236 aa8.32□□□□□ -1.08
CHFR-220ENST00000541817 ABLIM2Q6H8Q1 611 aa8.32□□□□□ -1.08
CHFR-220ENST00000541817 TNFAIP8L2Q6P589 184 aaPredicted RBP8.32□□□□□ -1.08
CHFR-220ENST00000541817 TSEN54Q7Z6J9 526 aaKnown RBP8.32□□□□□ -1.08
CHFR-220ENST00000541817 KRT73Q86Y46 540 aa8.32□□□□□ -1.08
CHFR-220ENST00000541817 WDFY1Q8IWB7 410 aa8.32□□□□□ -1.08
CHFR-220ENST00000541817 C17orf78Q8N4C9 275 aa8.32□□□□□ -1.08
CHFR-220ENST00000541817 TMCO5AQ8N6Q1 288 aa8.32□□□□□ -1.08
CHFR-220ENST00000541817 SMYD1Q8NB12 490 aa8.32□□□□□ -1.08
CHFR-220ENST00000541817 OR4F5Q8NH21 305 aa8.32□□□□□ -1.08
CHFR-220ENST00000541817 RHOXF1Q8NHV9 184 aa8.32□□□□□ -1.08
CHFR-220ENST00000541817 PHOSPHO1Q8TCT1 267 aa8.32□□□□□ -1.08
CHFR-220ENST00000541817 GPR151Q8TDV0 419 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms