RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ANKRA2Q9H9E1 313 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 FOLH1BQ9HBA9 442 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 MRPL47Q9HD33 250 aaKnown RBP3.27□□□□□ -1.89
SNHG1-217ENST00000541578 TREM2Q9NZC2 230 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 RAB23Q9ULC3 237 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 STAP1Q9ULZ2 295 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 PACSIN2Q9UNF0 486 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-217ENST00000541578 V9GYY5 206 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-217ENST00000541578 MYO15AQ9UKN7 3530 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 MYH7P12883 1935 aa3.27□□□□□ -1.89
SNHG1-217ENST00000541578 A0A1B0GTQ1 180 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 GOLGA6L4A6NEF3 574 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 EPM2AB3EWF7 344 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 LOC110117498-PIK3R3F6TDL0 507 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 WWP2O00308 870 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 DCTN6O00399 190 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 GOSR2O14653 212 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 ZNF253O75346 499 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 DUSP14O95147 198 aaKnown RBP3.26□□□□□ -1.89
SNHG1-217ENST00000541578 LYPD3O95274 346 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 GAPDHP04406 335 aaKnown RBP3.26□□□□□ -1.89
SNHG1-217ENST00000541578 C2P06681 752 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 IVLP07476 585 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 ANXA5P08758 320 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 OR8U8P0C7N1 319 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 IDO1P14902 403 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 ATP5C1P36542 298 aaKnown RBP3.26□□□□□ -1.89
SNHG1-217ENST00000541578 NUP62P37198 522 aaPredicted RBP3.26□□□□□ -1.89
SNHG1-217ENST00000541578 OPRD1P41143 372 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 KIR2DS2P43631 304 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 UQCRFS1P47985 274 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 GSSP48637 474 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 SLC26A2P50443 739 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 RAB9AP51151 201 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 BIDP55957 195 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 MRPS22P82650 360 aaKnown RBP3.26□□□□□ -1.89
SNHG1-217ENST00000541578 PAX2Q02962 417 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 GRB7Q14451 532 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 ALKBH6Q3KRA9 238 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 PARP15Q460N3 678 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 CCDC14Q49A88 953 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 HIGD2BQ4VC39 106 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 MARC1Q5VT66 337 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 PLCXD3Q63HM9 321 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 TIGD3Q6B0B8 471 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 TMEM53Q6P2H8 277 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 ACOT7LQ6ZUV0 252 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 FRA10AC1Q70Z53 315 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 TMEM105Q8N8V8 129 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 OR4A4PQ8NGN8 299 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 OR2G2Q8NGZ5 317 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 RHOXF1Q8NHV9 184 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 AGAP11Q8TF27 550 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 LZICQ8WZA0 190 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 KIFAP3Q92845 792 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 ISG20Q96AZ6 181 aaKnown RBP3.26□□□□□ -1.89
SNHG1-217ENST00000541578 PAGE5Q96GU1 130 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 PGLYRP4Q96LB8 373 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 MRPL45Q9BRJ2 306 aaKnown RBP3.26□□□□□ -1.89
SNHG1-217ENST00000541578 NAT9Q9BTE0 207 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 MFFQ9GZY8 342 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 DNTTIP1Q9H147 329 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 TMEM165Q9HC07 324 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 LYARQ9NX58 379 aaKnown RBP3.26□□□□□ -1.89
SNHG1-217ENST00000541578 B3GNT2Q9NY97 397 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 KLHL21Q9UJP4 597 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 VANGL2Q9ULK5 521 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 UBQLN1Q9UMX0 589 aaKnown RBP3.26□□□□□ -1.89
SNHG1-217ENST00000541578 PRELID1Q9Y255 219 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 GVINP1Q7Z2Y8 2422 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 MTCL1Q9Y4B5 1905 aaKnown RBP3.26□□□□□ -1.89
SNHG1-217ENST00000541578 COL4A6Q14031 1691 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 CFAP47Q6ZTR5 3102 aa3.26□□□□□ -1.89
SNHG1-217ENST00000541578 ATG2AQ2TAZ0 1938 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 MAP1BP46821 2468 aaKnown RBP3.25□□□□□ -1.89
SNHG1-217ENST00000541578 A0A1W2PPE3 182 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 ZNF705EA8MWA4 302 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-217ENST00000541578 FAM220BPB1ANY3 271 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 M0QZ92 97 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 HSD17B6O14756 317 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 POLR3GO15318 223 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-217ENST00000541578 CHMP2AO43633 222 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 ZNF189O75820 626 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-217ENST00000541578 OR7A10O76100 309 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 MYL2P10916 166 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 PRDX3P30048 256 aaKnown RBP3.25□□□□□ -1.89
SNHG1-217ENST00000541578 IL2RGP31785 369 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 RAB10P61026 200 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 LMO4P61968 165 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 SELENOTP62341 195 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 ERVK-25P63136 954 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 PPIDQ08752 370 aaKnown RBP3.25□□□□□ -1.89
SNHG1-217ENST00000541578 GPNMBQ14956 572 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 ZNF77Q15935 545 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 GSG1Q2KHT4 349 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 TIMM50Q3ZCQ8 353 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 HSP90AA4PQ58FG1 418 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 PIP5KL1Q5T9C9 394 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 WDR74Q6RFH5 385 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-217ENST00000541578 MOB1BQ7L9L4 216 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms