RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 ARRDC5A6NEK1 342 aa11.31□□□□□ -0.6
LTBR-208ENST00000541005 IDH3BO43837 385 aa11.31□□□□□ -0.6
LTBR-208ENST00000541005 NDUFS7O75251 213 aa11.31□□□□□ -0.6
LTBR-208ENST00000541005 CCNB2O95067 398 aa11.31□□□□□ -0.6
LTBR-208ENST00000541005 PPP1R3DO95685 299 aa11.31□□□□□ -0.6
LTBR-208ENST00000541005 ZNF32P17041 273 aa11.31□□□□□ -0.6
LTBR-208ENST00000541005 EVX1P49640 407 aa11.31□□□□□ -0.6
LTBR-208ENST00000541005 PPOXP50336 477 aa11.31□□□□□ -0.6
LTBR-208ENST00000541005 RPS23P62266 143 aaKnown RBP11.31□□□□□ -0.6
LTBR-208ENST00000541005 ENDOGQ14249 297 aaKnown RBP11.31□□□□□ -0.6
LTBR-208ENST00000541005 FLOT2Q14254 428 aa11.31□□□□□ -0.6
LTBR-208ENST00000541005 CLEC12BQ2HXU8 276 aa11.31□□□□□ -0.6
LTBR-208ENST00000541005 PTCHD4Q6ZW05 846 aa11.31□□□□□ -0.6
LTBR-208ENST00000541005 SYT9Q86SS6 491 aa11.31□□□□□ -0.6
LTBR-208ENST00000541005 FBXO17Q96EF6 278 aa11.31□□□□□ -0.6
LTBR-208ENST00000541005 DGCR6LQ9BY27 220 aa11.31□□□□□ -0.6
LTBR-208ENST00000541005 CADM1Q9BY67 442 aaKnown RBP11.31□□□□□ -0.6
LTBR-208ENST00000541005 SYT4Q9H2B2 425 aa11.31□□□□□ -0.6
LTBR-208ENST00000541005 KCNN2Q9H2S1 579 aa11.31□□□□□ -0.6
LTBR-208ENST00000541005 RNF121Q9H920 327 aa11.31□□□□□ -0.6
LTBR-208ENST00000541005 CCNB1IP1Q9NPC3 277 aa11.31□□□□□ -0.6
LTBR-208ENST00000541005 IL20RAQ9UHF4 553 aa11.31□□□□□ -0.6
LTBR-208ENST00000541005 POMPQ9Y244 141 aa11.31□□□□□ -0.6
LTBR-208ENST00000541005 SAMHD1Q9Y3Z3 626 aaKnown RBP11.31□□□□□ -0.6
LTBR-208ENST00000541005 SPEF1Q9Y4P9 236 aa11.31□□□□□ -0.6
LTBR-208ENST00000541005 IER3IP1Q9Y5U9 82 aa11.31□□□□□ -0.6
LTBR-208ENST00000541005 PMF1-BGLAPU3KQ54 211 aa11.31□□□□□ -0.6
LTBR-208ENST00000541005 HIVEP2P31629 2446 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 NAV3Q8IVL0 2385 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 IQCMA0A1B0GVH7 501 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 A0A1W2PPL8 197 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 TCRBV3S1A0A5B6 114 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 TRIM64A6NGJ6 449 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 TRIM64BA6NI03 449 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 VSTM5A8MXK1 200 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 H7C1Q1 480 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 SOCS2O14508 198 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 GSC2O15499 205 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 ICMTO60725 284 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 ATP5HO75947 161 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 INHBBP09529 407 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 LAP3P28838 519 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 PCSK6P29122 969 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 CDKN2AP42771 156 aaKnown RBP11.3□□□□□ -0.6
LTBR-208ENST00000541005 GUCA1AP43080 201 aaPredicted RBP11.3□□□□□ -0.6
LTBR-208ENST00000541005 RASSF2P50749 326 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 EFNA4P52798 201 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 PCBD1P61457 104 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 GALK2Q01415 458 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 HSF2Q03933 536 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 PLP2Q04941 152 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 SGCAQ16586 387 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 MSMPQ1L6U9 139 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 MICAQ29983 383 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 TBC1D28Q2M2D7 210 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 PABPC1L2AQ5JQF8 200 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 KRT80Q6KB66 452 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 VHLLQ6RSH7 139 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 RASSF6Q6ZTQ3 369 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 BIVMQ86UB2 503 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 PAQR4Q8N4S7 273 aaPredicted RBP11.3□□□□□ -0.6
LTBR-208ENST00000541005 AQP11Q8NBQ7 271 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 CPEB3Q8NE35 698 aaKnown RBP11.3□□□□□ -0.6
LTBR-208ENST00000541005 OR1J2Q8NGS2 313 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 CANT1Q8WVQ1 401 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 MRPL24Q96A35 216 aaKnown RBP11.3□□□□□ -0.6
LTBR-208ENST00000541005 SAMD8Q96LT4 415 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 ERMAPQ96PL5 475 aaPredicted RBP11.3□□□□□ -0.6
LTBR-208ENST00000541005 DOK1Q99704 481 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 ZNF416Q9BWM5 594 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 CHID1Q9BWS9 393 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 OR2H1Q9GZK4 316 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 IL20Q9NYY1 176 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 CMAHPQ9Y471 501 aa11.3□□□□□ -0.6
LTBR-208ENST00000541005 SONP18583 2426 aaKnown RBP11.3□□□□□ -0.6
LTBR-208ENST00000541005 FN1P02751 2386 aaKnown RBP11.3□□□□□ -0.6
LTBR-208ENST00000541005 TANC2Q9HCD6 1990 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 MALRD1Q5VYJ5 2156 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 TMEM129A0AVI4 362 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 C12orf71A8MTZ7 269 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 BHLHE40O14503 412 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 GPRIN2O60269 458 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 KHDRBS3O75525 346 aaKnown RBP11.29□□□□□ -0.6
LTBR-208ENST00000541005 SCG5P05408 212 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 GSTM3P21266 225 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 STOMP27105 288 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 APEX1P27695 318 aaKnown RBP11.29□□□□□ -0.6
LTBR-208ENST00000541005 CRABP1P29762 137 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 NUDT6P53370 316 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 LSM6P62312 80 aaKnown RBP11.29□□□□□ -0.6
LTBR-208ENST00000541005 PSG4Q00888 419 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 TNK1Q13470 666 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 RAB35Q15286 201 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 KCNMB1Q16558 191 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 CD300LDQ6UXZ3 194 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 GLB1L2Q8IW92 636 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 CIARTQ8N365 385 aaPredicted RBP11.29□□□□□ -0.6
LTBR-208ENST00000541005 PAPD5Q8NDF8 572 aaKnown RBP11.29□□□□□ -0.6
LTBR-208ENST00000541005 OR52L1Q8NGH7 329 aa11.29□□□□□ -0.6
LTBR-208ENST00000541005 POM121L2Q96KW2 1035 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms