RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 SOX14O95416 240 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 PTHP01270 115 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 SCG5P05408 212 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 IGFBP1P08833 259 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-215ENST00000540904 MMP7P09237 267 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-215ENST00000540904 BMP4P12644 408 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 CCL2P13500 99 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 ZNF35P13682 527 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 CD99P14209 185 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 HIST1H1CP16403 213 aaKnown RBP7.98□□□□□ -1.13
SNHG1-215ENST00000540904 ZNF32P17041 273 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 MSR1P21757 451 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 NR4A1P22736 598 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 APEX1P27695 318 aaKnown RBP7.98□□□□□ -1.13
SNHG1-215ENST00000540904 THBS4P35443 961 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 CENPAP49450 140 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 CBX1P83916 185 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 GALK2Q01415 458 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 DBPQ10586 325 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-215ENST00000540904 SNTB2Q13425 540 aaKnown RBP7.98□□□□□ -1.13
SNHG1-215ENST00000540904 TBC1D28Q2M2D7 210 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 MST1LQ2TV78 715 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 PABPC1L2AQ5JQF8 200 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 C1orf146Q5VVC0 180 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 OTPQ5XKR4 325 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 C11orf71Q6IPW1 123 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 RPL13AP3Q6NVV1 102 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 LEG1Q6P5S2 330 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 UGT2A3Q6UWM9 527 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 PRSS57Q6UWY2 283 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 RASSF6Q6ZTQ3 369 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 CCDC121Q6ZUS5 278 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 FOXL2NBQ6ZUU3 175 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 CPEB3Q8NE35 698 aaKnown RBP7.98□□□□□ -1.13
SNHG1-215ENST00000540904 OR4K13Q8NH42 304 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 GIPC3Q8TF64 312 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 Q96MF0 132 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 TSSK2Q96PF2 358 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 NMNAT3Q96T66 252 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 FEVQ99581 238 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 PLA2G12AQ9BZM1 189 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 NUAK2Q9H093 628 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 MMADHCQ9H3L0 296 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-215ENST00000540904 ZNF442Q9H7R0 627 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 CDH20Q9HBT6 801 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 EMC7Q9NPA0 242 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 POLE4Q9NR33 117 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 TBC1D23Q9NUY8 699 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 VSX1Q9NZR4 365 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-215ENST00000540904 GDF2Q9UK05 429 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-215ENST00000540904 COA3Q9Y2R0 106 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-215ENST00000540904 SPEF1Q9Y4P9 236 aa7.98□□□□□ -1.13
SNHG1-215ENST00000540904 DSCAMO60469 2012 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 C12orf71A8MTZ7 269 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 VSTM5A8MXK1 200 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 DCTN6O00399 190 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 BHLHE40O14503 412 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 IDH3BO43837 385 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 GPRIN2O60269 458 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 TIPRLO75663 272 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 MPZL1O95297 269 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 RENP00797 406 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 IGHV4-39P01824 125 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 CST2P09228 141 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 FAM157BP0CG42 384 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 GSTM3P21266 225 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 CCNOP22674 350 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 STOMP27105 288 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 APLNRP35414 380 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 PCBD1P61457 104 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 SNRPD2P62316 118 aaKnown RBP7.97□□□□□ -1.13
SNHG1-215ENST00000540904 PSG4Q00888 419 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 ENDOGQ14249 297 aaKnown RBP7.97□□□□□ -1.13
SNHG1-215ENST00000540904 GK3PQ14409 553 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 RAB35Q15286 201 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 SWI5Q1ZZU3 235 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 DNM1P34Q6PK57 102 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.97□□□□□ -1.13
SNHG1-215ENST00000540904 TMEM179BQ7Z7N9 219 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 GLB1L2Q8IW92 636 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 PAQR4Q8N4S7 273 aaPredicted RBP7.97□□□□□ -1.13
SNHG1-215ENST00000540904 PAPD5Q8NDF8 572 aaKnown RBP7.97□□□□□ -1.13
SNHG1-215ENST00000540904 SDR9C7Q8NEX9 313 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 OR52E2Q8NGJ4 325 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 OR8D4Q8NGM9 314 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 OR1J2Q8NGS2 313 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 AKR7LQ8NHP1 331 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 SLCO4A1Q96BD0 722 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 NIPSNAP1Q9BPW8 284 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 ZNF416Q9BWM5 594 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 TSSK6Q9BXA6 273 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 DGCR6LQ9BY27 220 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 OR2H1Q9GZK4 316 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 WNT5BQ9H1J7 359 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 OR51B6Q9H340 312 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 C1orf198Q9H425 327 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 FN3KQ9H479 309 aa7.97□□□□□ -1.13
SNHG1-215ENST00000540904 SRA1Q9HD15 236 aaKnown RBP7.97□□□□□ -1.13
SNHG1-215ENST00000540904 RPRD1BQ9NQG5 326 aaKnown RBP7.97□□□□□ -1.13
SNHG1-215ENST00000540904 ARMC1Q9NVT9 282 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms