RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 GMNCA6NCL1 334 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 MRASO14807 208 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 PIP5K1CO60331 668 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 IFNA14P01570 189 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 IGHV1-46P01743 117 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 IGHV2-5P01817 119 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 THRBP10828 461 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 MAKP20794 623 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 CFPP27918 469 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 MPV17P39210 176 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 GDI2P50395 445 aaKnown RBP12.01□□□□□ -0.49
SNHG1-213ENST00000540725 MMP15P51511 669 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 ERVK-25P63136 954 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 ACTG1P63261 375 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 PSG4Q00888 419 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 TOP3AQ13472 1001 aaPredicted RBP12.01□□□□□ -0.49
SNHG1-213ENST00000540725 ALG10Q5BKT4 473 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 TMEM255AQ5JRV8 349 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 FAM209AQ5JX71 171 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 THEM4Q5T1C6 240 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 SLC25A47Q6Q0C1 308 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 OR4M2Q8NGB6 313 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 SLC25A40Q8TBP6 338 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 RAB1CQ92928 201 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 MARS2Q96GW9 593 aaKnown RBP12.01□□□□□ -0.49
SNHG1-213ENST00000540725 TIMD4Q96H15 378 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 ZNF583Q96ND8 569 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 ALG12Q9BV10 488 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 TMEM120AQ9BXJ8 343 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 EIF3KQ9UBQ5 218 aaKnown RBP12.01□□□□□ -0.49
SNHG1-213ENST00000540725 PCDHB10Q9UN67 800 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 HIF3AQ9Y2N7 669 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 DOCK11Q5JSL3 2073 aa12.01□□□□□ -0.49
SNHG1-213ENST00000540725 PLSCR5A0PG75 271 aa12□□□□□ -0.49
SNHG1-213ENST00000540725 SPRY3O43610 288 aa12□□□□□ -0.49
SNHG1-213ENST00000540725 HILS1P60008 231 aa12□□□□□ -0.49
SNHG1-213ENST00000540725 RPL27P61353 136 aaKnown RBP12□□□□□ -0.49
SNHG1-213ENST00000540725 TAF11Q15544 211 aa12□□□□□ -0.49
SNHG1-213ENST00000540725 LRRC23Q53EV4 343 aaPredicted RBP12□□□□□ -0.49
SNHG1-213ENST00000540725 CYBRD1Q53TN4 286 aa12□□□□□ -0.49
SNHG1-213ENST00000540725 COQ5Q5HYK3 327 aa12□□□□□ -0.49
SNHG1-213ENST00000540725 FAM27BQ5VT28 67 aa12□□□□□ -0.49
SNHG1-213ENST00000540725 UNQ6126/PRO20091Q6UXV3 157 aa12□□□□□ -0.49
SNHG1-213ENST00000540725 RFPL4BQ6ZWI9 263 aa12□□□□□ -0.49
SNHG1-213ENST00000540725 USP43Q70EL4 1123 aa12□□□□□ -0.49
SNHG1-213ENST00000540725 C1QL2Q7Z5L3 287 aa12□□□□□ -0.49
SNHG1-213ENST00000540725 KLF14Q8TD94 323 aaPredicted RBP12□□□□□ -0.49
SNHG1-213ENST00000540725 C10orf82Q8WW14 230 aa12□□□□□ -0.49
SNHG1-213ENST00000540725 RBP7Q96R05 134 aa12□□□□□ -0.49
SNHG1-213ENST00000540725 TMPRSS13Q9BYE2 586 aa12□□□□□ -0.49
SNHG1-213ENST00000540725 OR2H1Q9GZK4 316 aa12□□□□□ -0.49
SNHG1-213ENST00000540725 OR2J1Q9GZK6 312 aa12□□□□□ -0.49
SNHG1-213ENST00000540725 WNT5BQ9H1J7 359 aa12□□□□□ -0.49
SNHG1-213ENST00000540725 ZSCAN5BA6NJL1 495 aa11.99□□□□□ -0.49
SNHG1-213ENST00000540725 BBIP1A8MTZ0 92 aa11.99□□□□□ -0.49
SNHG1-213ENST00000540725 NPPAP01160 153 aa11.99□□□□□ -0.49
SNHG1-213ENST00000540725 IGHMP01871 453 aa11.99□□□□□ -0.49
SNHG1-213ENST00000540725 CST2P09228 141 aa11.99□□□□□ -0.49
SNHG1-213ENST00000540725 IFI30P13284 250 aa11.99□□□□□ -0.49
SNHG1-213ENST00000540725 LAP3P28838 519 aa11.99□□□□□ -0.49
SNHG1-213ENST00000540725 PPP1CBP62140 327 aa11.99□□□□□ -0.49
SNHG1-213ENST00000540725 ST3GAL3Q11203 375 aa11.99□□□□□ -0.49
SNHG1-213ENST00000540725 DCAF12L2Q5VW00 463 aa11.99□□□□□ -0.49
SNHG1-213ENST00000540725 MBNL2Q5VZF2 373 aaKnown RBP11.99□□□□□ -0.49
SNHG1-213ENST00000540725 ALDH16A1Q8IZ83 802 aa11.99□□□□□ -0.49
SNHG1-213ENST00000540725 CLDN22Q8N7P3 220 aa11.99□□□□□ -0.49
SNHG1-213ENST00000540725 ABHD4Q8TB40 342 aa11.99□□□□□ -0.49
SNHG1-213ENST00000540725 FNDC8Q8TC99 324 aa11.99□□□□□ -0.49
SNHG1-213ENST00000540725 CCL17Q92583 94 aa11.99□□□□□ -0.49
SNHG1-213ENST00000540725 BPIFA2Q96DR5 249 aa11.99□□□□□ -0.49
SNHG1-213ENST00000540725 TPD52L3Q96J77 140 aa11.99□□□□□ -0.49
SNHG1-213ENST00000540725 PRRC1Q96M27 445 aa11.99□□□□□ -0.49
SNHG1-213ENST00000540725 GAL3ST1Q99999 423 aa11.99□□□□□ -0.49
SNHG1-213ENST00000540725 EGLN1Q9GZT9 426 aa11.99□□□□□ -0.49
SNHG1-213ENST00000540725 MRGBPQ9NV56 204 aa11.99□□□□□ -0.49
SNHG1-213ENST00000540725 A4GNTQ9UNA3 340 aa11.99□□□□□ -0.49
SNHG1-213ENST00000540725 HTR3EA5X5Y0 456 aa11.98□□□□□ -0.49
SNHG1-213ENST00000540725 FAM220BPB1ANY3 271 aa11.98□□□□□ -0.49
SNHG1-213ENST00000540725 H3BSA7 217 aa11.98□□□□□ -0.49
SNHG1-213ENST00000540725 TRIM77I1YAP6 450 aa11.98□□□□□ -0.49
SNHG1-213ENST00000540725 J3QLI3 93 aa11.98□□□□□ -0.49
SNHG1-213ENST00000540725 ICMTO60725 284 aa11.98□□□□□ -0.49
SNHG1-213ENST00000540725 NGFP01138 241 aa11.98□□□□□ -0.49
SNHG1-213ENST00000540725 ADH4P08319 380 aa11.98□□□□□ -0.49
SNHG1-213ENST00000540725 ADRA2CP18825 462 aa11.98□□□□□ -0.49
SNHG1-213ENST00000540725 KDELR2P33947 212 aa11.98□□□□□ -0.49
SNHG1-213ENST00000540725 ARFIP2P53365 341 aa11.98□□□□□ -0.49
SNHG1-213ENST00000540725 CTXN1P60606 82 aa11.98□□□□□ -0.49
SNHG1-213ENST00000540725 KLF10Q13118 480 aa11.98□□□□□ -0.49
SNHG1-213ENST00000540725 FAM205BPQ63HN1 556 aa11.98□□□□□ -0.49
SNHG1-213ENST00000540725 ZNF774Q6NX45 483 aa11.98□□□□□ -0.49
SNHG1-213ENST00000540725 FOXL2NBQ6ZUU3 175 aa11.98□□□□□ -0.49
SNHG1-213ENST00000540725 ZNF771Q7L3S4 317 aaPredicted RBP11.98□□□□□ -0.49
SNHG1-213ENST00000540725 HDXQ7Z353 690 aa11.98□□□□□ -0.49
SNHG1-213ENST00000540725 PEG10Q86TG7 708 aaKnown RBP11.98□□□□□ -0.49
SNHG1-213ENST00000540725 IGFN1Q86VF2 1251 aa11.98□□□□□ -0.49
SNHG1-213ENST00000540725 C1orf174Q8IYL3 243 aa11.98□□□□□ -0.49
SNHG1-213ENST00000540725 FAM216AQ8WUB2 273 aa11.98□□□□□ -0.49
SNHG1-213ENST00000540725 JMJD8Q96S16 334 aa11.98□□□□□ -0.49
SNHG1-213ENST00000540725 PLA2G12AQ9BZM1 189 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms