RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 TNFRSF11BO00300 401 aa12.98□□□□□ -0.33
UBE3B-212ENST00000540230 XKRYO14609 159 aa12.98□□□□□ -0.33
UBE3B-212ENST00000540230 LY6G6DO95868 133 aa12.98□□□□□ -0.33
UBE3B-212ENST00000540230 FAM157BP0CG42 384 aa12.98□□□□□ -0.33
UBE3B-212ENST00000540230 CDKN2AP42771 156 aaKnown RBP12.98□□□□□ -0.33
UBE3B-212ENST00000540230 ERVS71-1P61550 626 aa12.98□□□□□ -0.33
UBE3B-212ENST00000540230 PSG4Q00888 419 aa12.98□□□□□ -0.33
UBE3B-212ENST00000540230 RFX4Q33E94 735 aa12.98□□□□□ -0.33
UBE3B-212ENST00000540230 GPR139Q6DWJ6 353 aa12.98□□□□□ -0.33
UBE3B-212ENST00000540230 PGM2L1Q6PCE3 622 aa12.98□□□□□ -0.33
UBE3B-212ENST00000540230 DPY19L2P2Q6ZN68 376 aa12.98□□□□□ -0.33
UBE3B-212ENST00000540230 DPPA2Q7Z7J5 298 aa12.98□□□□□ -0.33
UBE3B-212ENST00000540230 SAMD8Q96LT4 415 aa12.98□□□□□ -0.33
UBE3B-212ENST00000540230 TSSK2Q96PF2 358 aa12.98□□□□□ -0.33
UBE3B-212ENST00000540230 VRK1Q99986 396 aaPredicted RBP12.98□□□□□ -0.33
UBE3B-212ENST00000540230 EMC7Q9NPA0 242 aa12.98□□□□□ -0.33
UBE3B-212ENST00000540230 POLE4Q9NR33 117 aa12.98□□□□□ -0.33
UBE3B-212ENST00000540230 MYEF2Q9P2K5 600 aaKnown RBP12.98□□□□□ -0.33
UBE3B-212ENST00000540230 FBXL3Q9UKT7 428 aa12.98□□□□□ -0.33
UBE3B-212ENST00000540230 U3KQV3 271 aa12.98□□□□□ -0.33
UBE3B-212ENST00000540230 TLN2Q9Y4G6 2542 aa12.97□□□□□ -0.33
UBE3B-212ENST00000540230 DCTN6O00399 190 aa12.97□□□□□ -0.33
UBE3B-212ENST00000540230 GYG2O15488 501 aa12.97□□□□□ -0.33
UBE3B-212ENST00000540230 GPANK1O95872 356 aa12.97□□□□□ -0.33
UBE3B-212ENST00000540230 TXNDC12O95881 172 aa12.97□□□□□ -0.33
UBE3B-212ENST00000540230 GLRXP35754 106 aa12.97□□□□□ -0.33
UBE3B-212ENST00000540230 EFNA4P52798 201 aa12.97□□□□□ -0.33
UBE3B-212ENST00000540230 GALK2Q01415 458 aa12.97□□□□□ -0.33
UBE3B-212ENST00000540230 TSPAN31Q12999 210 aa12.97□□□□□ -0.33
UBE3B-212ENST00000540230 ZNF770Q6IQ21 691 aaPredicted RBP12.97□□□□□ -0.33
UBE3B-212ENST00000540230 CLEC9AQ6UXN8 241 aa12.97□□□□□ -0.33
UBE3B-212ENST00000540230 ZNF620Q6ZNG0 422 aa12.97□□□□□ -0.33
UBE3B-212ENST00000540230 ADGRG5Q8IZF4 528 aa12.97□□□□□ -0.33
UBE3B-212ENST00000540230 GNPDA2Q8TDQ7 276 aa12.97□□□□□ -0.33
UBE3B-212ENST00000540230 MRPL24Q96A35 216 aaKnown RBP12.97□□□□□ -0.33
UBE3B-212ENST00000540230 ERMAPQ96PL5 475 aaPredicted RBP12.97□□□□□ -0.33
UBE3B-212ENST00000540230 SYT3Q9BQG1 590 aa12.97□□□□□ -0.33
UBE3B-212ENST00000540230 ZNF416Q9BWM5 594 aa12.97□□□□□ -0.33
UBE3B-212ENST00000540230 REG4Q9BYZ8 158 aa12.97□□□□□ -0.33
UBE3B-212ENST00000540230 NDEL1Q9GZM8 345 aa12.97□□□□□ -0.33
UBE3B-212ENST00000540230 NUAK2Q9H093 628 aa12.97□□□□□ -0.33
UBE3B-212ENST00000540230 WNT5BQ9H1J7 359 aa12.97□□□□□ -0.33
UBE3B-212ENST00000540230 EGLN3Q9H6Z9 239 aa12.97□□□□□ -0.33
UBE3B-212ENST00000540230 CCNB1IP1Q9NPC3 277 aa12.97□□□□□ -0.33
UBE3B-212ENST00000540230 VSX1Q9NZR4 365 aaPredicted RBP12.97□□□□□ -0.33
UBE3B-212ENST00000540230 SLC7A8Q9UHI5 535 aa12.97□□□□□ -0.33
UBE3B-212ENST00000540230 CMAHPQ9Y471 501 aa12.97□□□□□ -0.33
UBE3B-212ENST00000540230 LOC100509620A0A075B734 347 aa12.96□□□□□ -0.33
UBE3B-212ENST00000540230 A0A096LNT2 108 aa12.96□□□□□ -0.33
UBE3B-212ENST00000540230 SLC16A7O60669 478 aa12.96□□□□□ -0.33
UBE3B-212ENST00000540230 KRT36O76013 467 aa12.96□□□□□ -0.33
UBE3B-212ENST00000540230 MPZL1O95297 269 aa12.96□□□□□ -0.33
UBE3B-212ENST00000540230 GASTP01350 101 aa12.96□□□□□ -0.33
UBE3B-212ENST00000540230 CST2P09228 141 aa12.96□□□□□ -0.33
UBE3B-212ENST00000540230 BMP4P12644 408 aa12.96□□□□□ -0.33
UBE3B-212ENST00000540230 MSR1P21757 451 aa12.96□□□□□ -0.33
UBE3B-212ENST00000540230 RPS6KA3P51812 740 aa12.96□□□□□ -0.33
UBE3B-212ENST00000540230 HSF2Q03933 536 aa12.96□□□□□ -0.33
UBE3B-212ENST00000540230 KRTAP1-1Q07627 177 aa12.96□□□□□ -0.33
UBE3B-212ENST00000540230 FAM98BQ52LJ0 330 aaKnown RBP12.96□□□□□ -0.33
UBE3B-212ENST00000540230 OR2T5Q6IEZ7 315 aa12.96□□□□□ -0.33
UBE3B-212ENST00000540230 OR10H5Q8NGA6 315 aa12.96□□□□□ -0.33
UBE3B-212ENST00000540230 OR2T29Q8NH02 315 aa12.96□□□□□ -0.33
UBE3B-212ENST00000540230 CANT1Q8WVQ1 401 aa12.96□□□□□ -0.33
UBE3B-212ENST00000540230 LRGUKQ96M69 825 aa12.96□□□□□ -0.33
UBE3B-212ENST00000540230 PLA2G12AQ9BZM1 189 aa12.96□□□□□ -0.33
UBE3B-212ENST00000540230 TRIM15Q9C019 465 aa12.96□□□□□ -0.33
UBE3B-212ENST00000540230 OR2H1Q9GZK4 316 aa12.96□□□□□ -0.33
UBE3B-212ENST00000540230 KCNN2Q9H2S1 579 aa12.96□□□□□ -0.33
UBE3B-212ENST00000540230 RERGLQ9H628 205 aa12.96□□□□□ -0.33
UBE3B-212ENST00000540230 CDH20Q9HBT6 801 aa12.96□□□□□ -0.33
UBE3B-212ENST00000540230 COA3Q9Y2R0 106 aaPredicted RBP12.96□□□□□ -0.33
UBE3B-212ENST00000540230 IQCMA0A1B0GVH7 501 aa12.95□□□□□ -0.34
UBE3B-212ENST00000540230 SNAP29O95721 258 aa12.95□□□□□ -0.34
UBE3B-212ENST00000540230 F12P00748 615 aaPredicted RBP12.95□□□□□ -0.34
UBE3B-212ENST00000540230 APEHP13798 732 aaKnown RBP12.95□□□□□ -0.34
UBE3B-212ENST00000540230 HIST1H1CP16403 213 aaKnown RBP12.95□□□□□ -0.34
UBE3B-212ENST00000540230 CCNOP22674 350 aa12.95□□□□□ -0.34
UBE3B-212ENST00000540230 SLC6A6P31641 620 aa12.95□□□□□ -0.34
UBE3B-212ENST00000540230 IFNGR2P38484 337 aa12.95□□□□□ -0.34
UBE3B-212ENST00000540230 WNT5AP41221 380 aa12.95□□□□□ -0.34
UBE3B-212ENST00000540230 PPOXP50336 477 aa12.95□□□□□ -0.34
UBE3B-212ENST00000540230 ERFP50548 548 aa12.95□□□□□ -0.34
UBE3B-212ENST00000540230 PLP2Q04941 152 aa12.95□□□□□ -0.34
UBE3B-212ENST00000540230 TRAP1Q12931 704 aaKnown RBP12.95□□□□□ -0.34
UBE3B-212ENST00000540230 MAD2L1BPQ15013 274 aaPredicted RBP12.95□□□□□ -0.34
UBE3B-212ENST00000540230 TBC1D28Q2M2D7 210 aa12.95□□□□□ -0.34
UBE3B-212ENST00000540230 DNAL1Q4LDG9 190 aa12.95□□□□□ -0.34
UBE3B-212ENST00000540230 ZNF774Q6NX45 483 aa12.95□□□□□ -0.34
UBE3B-212ENST00000540230 ADCK1Q86TW2 530 aa12.95□□□□□ -0.34
UBE3B-212ENST00000540230 OR8D4Q8NGM9 314 aa12.95□□□□□ -0.34
UBE3B-212ENST00000540230 POM121L2Q96KW2 1035 aa12.95□□□□□ -0.34
UBE3B-212ENST00000540230 NMNAT3Q96T66 252 aa12.95□□□□□ -0.34
UBE3B-212ENST00000540230 IFT27Q9BW83 186 aa12.95□□□□□ -0.34
UBE3B-212ENST00000540230 C1orf198Q9H425 327 aa12.95□□□□□ -0.34
UBE3B-212ENST00000540230 SAMHD1Q9Y3Z3 626 aaKnown RBP12.95□□□□□ -0.34
UBE3B-212ENST00000540230 SPEF1Q9Y4P9 236 aa12.95□□□□□ -0.34
UBE3B-212ENST00000540230 FN1P02751 2386 aaKnown RBP12.94□□□□□ -0.34
UBE3B-212ENST00000540230 NSD1Q96L73 2696 aaPredicted RBP12.94□□□□□ -0.34
UBE3B-212ENST00000540230 AHCYL1O43865 530 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms