RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 NOTCH2Q04721 2471 aa6.08□□□□□ -1.44
LPCAT3-209ENST00000540060 CELSR1Q9NYQ6 3014 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 HEATR1Q9H583 2144 aaKnown RBP6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 M0R1B8 84 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 ABCD4O14678 606 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 SLC16A7O60669 478 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 MITFO75030 526 aaPredicted RBP6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 FARS2O95363 451 aaKnown RBP6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 PLAUP00749 431 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 RENP00797 406 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 ALPLP05186 524 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 SCG5P05408 212 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 CELA3BP08861 270 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 MMP7P09237 267 aaPredicted RBP6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 CECR9P0C854 216 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 GAAP10253 952 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 CBR1P16152 277 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 ZNF14P17017 642 aaPredicted RBP6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 NPR2P20594 1047 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 MSR1P21757 451 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 IGFBP5P24593 272 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 PTAFRP25105 342 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 CD40P25942 277 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 POU1F1P28069 291 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 CRABP1P29762 137 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 ARR3P36575 388 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 CAPZA2P47755 286 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 CRISP1P54107 249 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 ESRRGP62508 458 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 CDK5Q00535 292 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 DBPQ10586 325 aaPredicted RBP6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 CRMP1Q14194 572 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 ENDOGQ14249 297 aaKnown RBP6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 C3orf36Q3SXR2 165 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 SLC35F1Q5T1Q4 408 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 FAM27BQ5VT28 67 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 FBXW10Q5XX13 1052 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 ACSM5Q6NUN0 579 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 ADAM5Q6NVV9 412 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 SLC27A4Q6P1M0 643 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 DNM1P34Q6PK57 102 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 TMEM108Q6UXF1 575 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 ZNF704Q6ZNC4 412 aaPredicted RBP6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 SLC16A14Q7RTX9 510 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 ZBTB46Q86UZ6 589 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 MDP1Q86V88 176 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 OR6V1Q8N148 313 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 LRRC18Q8N456 261 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 CYB561A3Q8NBI2 242 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 SLC37A3Q8NCC5 494 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 KBTBD8Q8NFY9 601 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 OR52E2Q8NGJ4 325 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 FGFBP3Q8TAT2 258 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 LURAP1Q96LR2 239 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 FOXN4Q96NZ1 517 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 DDOQ99489 341 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 CIB1Q99828 191 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 RBM4Q9BWF3 364 aaKnown RBP6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 OSBPL10Q9BXB5 764 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 C1QTNF6Q9BXI9 259 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 GABARAPL3Q9BY60 117 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 NMNAT2Q9BZQ4 307 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 RACGAP1Q9H0H5 632 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 PLEKHF2Q9H8W4 249 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 SEC61A2Q9H9S3 476 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 SIAEQ9HAT2 523 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 RPRD1BQ9NQG5 326 aaKnown RBP6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 POLE4Q9NR33 117 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 CMC2Q9NRP2 79 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 USE1Q9NZ43 259 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 KLHL21Q9UJP4 597 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 COA3Q9Y2R0 106 aaPredicted RBP6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 RNF115Q9Y4L5 304 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 CACNA1DQ01668 2161 aa6.07□□□□□ -1.44
LPCAT3-209ENST00000540060 AKAP9Q99996 3911 aa6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 RIIAD1A6NNX1 92 aa6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 ZAR1LA6NP61 321 aa6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 SHISA9B4DS77 424 aa6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 EI24O14681 340 aa6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 SURF4O15260 269 aa6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 MGRN1O60291 552 aa6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 KHDRBS3O75525 346 aaKnown RBP6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 RAB36O95755 333 aa6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 GPANK1O95872 356 aa6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 IFNGP01579 166 aa6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 CD3EP07766 207 aa6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 CST2P09228 141 aa6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 PATE4P0C8F1 98 aa6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 CD79AP11912 226 aa6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 ZNF3P17036 446 aa6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 ZNF32P17041 273 aa6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 LAP3P28838 519 aa6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 EPHA2P29317 976 aa6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 GIPRP48546 466 aa6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 PTDSS1P48651 473 aaKnown RBP6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 IDH3GP51553 393 aaPredicted RBP6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 RAB1AP62820 205 aa6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 NAAAQ02083 359 aa6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 GLO1Q04760 184 aa6.06□□□□□ -1.44
LPCAT3-209ENST00000540060 PIGFQ07326 219 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms