RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 FAM174AQ8TBP5 190 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 ZNF296Q8WUU4 475 aaPredicted RBP12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 POLE3Q9NRF9 147 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 KLK13Q9UKR3 277 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 TRIOO75962 3097 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 TMEM218A2RU14 115 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 C11orf98E9PRG8 122 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 APBB3O95704 486 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 MFGE8Q08431 387 aaPredicted RBP12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 PAN3Q58A45 887 aaKnown RBP12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 C1QL3Q5VWW1 255 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 HAGHLQ6PII5 290 aaPredicted RBP12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 CSNK1A1LQ8N752 337 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 GVQW1Q8N7I0 195 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 BCORP1Q8N888 145 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 CASTOR1Q8WTX7 329 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 CMBLQ96DG6 245 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 CYYR1Q96J86 154 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 TOX2Q96NM4 488 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 DCBLD2Q96PD2 775 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 ALX4Q9H161 411 aaPredicted RBP12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 MMP25Q9NPA2 562 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 TMED7Q9Y3B3 224 aa12.57□□□□□ -0.4
SCNN1A-215ENST00000540037 SLC17A2O00624 439 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 TNFSF14O43557 240 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 SLC35E2P0CK97 266 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 APEHP13798 732 aaKnown RBP12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 C5AR1P21730 350 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 PSMD4P55036 377 aaKnown RBP12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 TAS2R19P59542 299 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 B2MP61769 119 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 PLEKHN1Q494U1 663 aaPredicted RBP12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 OR52W1Q6IF63 320 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 PAQR8Q8TEZ7 354 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 CCDC107Q8WV48 283 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 MRGPRFQ96AM1 343 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 SLC22A18Q96BI1 424 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 ZBTB8AQ96BR9 441 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 GPX7Q96SL4 187 aaPredicted RBP12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 LMF2Q9BU23 707 aaKnown RBP12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 FAM60AQ9NP50 221 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 TAS2R4Q9NYW5 299 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 HIF3AQ9Y2N7 669 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 EEF1E1-BLOC1S5C9J1V9 151 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 LMX1BO60663 402 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 DCNP07585 359 aaKnown RBP12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 AGTR1P30556 359 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 CASRP41180 1078 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 SLC25A1P53007 311 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 PPP1R1AQ13522 171 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 KIR2DS3Q14952 304 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 RAB12Q6IQ22 244 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 TMPPEQ6ZT21 453 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 KCTD9Q7L273 389 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 ACBD4Q8NC06 268 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 ZC3H10Q96K80 434 aaKnown RBP12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 CMSS1Q9BQ75 279 aaKnown RBP12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 CST11Q9H112 138 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 TLNRD1Q9H1K6 362 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 GDE1Q9NZC3 331 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 A0A0A6YYC8 382 aaPredicted RBP12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 I3L1I5 382 aaPredicted RBP12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 K7EQS6 105 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 SULT2B1O00204 365 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 MAOBP27338 520 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 SPOCK1Q08629 439 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 C16orf52Q8NHV5 167 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 HOXB13Q92826 284 aaPredicted RBP12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 RBM18Q96H35 190 aaKnown RBP12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 INTS14Q96SY0 518 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 CMKLR1Q99788 373 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 POTEKPQ9BYX7 375 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 GAREM1Q9H706 876 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 COMMD9Q9P000 198 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 MBD2Q9UBB5 411 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 B9D1Q9UPM9 204 aa12.56□□□□□ -0.4
SCNN1A-215ENST00000540037 A0A1W2PPC1 479 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 WIPF3A6NGB9 483 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 ZNF736B4DX44 427 aaPredicted RBP12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 OR2T1O43869 369 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 HNRNPA1P09651 372 aaKnown RBP eCLIP12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 MAOAP21397 527 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 KCNJ3P48549 501 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 ACTBP60709 375 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 SKP1P63208 163 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 ACTG1P63261 375 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 TFF2Q03403 129 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 PRAMEF17Q5VTA0 474 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 FAM166AQ6J272 317 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 METTL27Q8N6F8 245 aaPredicted RBP12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 OR5T2Q8NGG2 359 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 CAPNS2Q96L46 248 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 YBX2Q9Y2T7 364 aaKnown RBP12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 FREM3P0C091 2139 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 KIF26BQ2KJY2 2108 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 OR2AT4A6NND4 320 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 EFCAB7A8K855 629 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 SULT1C2O00338 296 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 TMEM127O75204 238 aa12.55□□□□□ -0.4
SCNN1A-215ENST00000540037 CYB5AP00167 134 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms