RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 OR2A7Q96R45 310 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 AMELYQ99218 206 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 NRSN2Q9GZP1 204 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 ZMAT5Q9UDW3 170 aaKnown RBP11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 CDV3Q9UKY7 258 aaKnown RBP11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 SLC22A13Q9Y226 551 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 MRPS33Q9Y291 106 aaKnown RBP11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 HIF3AQ9Y2N7 669 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 CDC14CA4D256 554 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 ELOA3DA6NLF2 546 aaPredicted RBP11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 HLA-DQA2P01906 255 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 CCKBRP32239 447 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 CAPZA2P47755 286 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 TOMM34Q15785 309 aaPredicted RBP11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 ELOA3BQ3SY89 546 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 SLC35D3Q5M8T2 416 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 SPICQ8N5J4 248 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 ELOA3Q8NG57 546 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 PNO1Q9NRX1 252 aaKnown RBP11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 ASF1BQ9NVP2 202 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 PLCL2Q9UPR0 1127 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 FRYLO94915 3013 aa11.34□□□□□ -0.59
SFSWAP-208ENST00000539506 ITGA10O75578 1167 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 HPP00738 406 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 GLAP06280 429 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 OR1D4P47884 311 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 HSD17B7P56937 341 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 CTXN1P60606 82 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 PRPS1P60891 318 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 ISXQ2M1V0 245 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 MESTQ5EB52 335 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 WBP2NLQ6ICG8 309 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 MDGA2Q7Z553 956 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 BEST3Q8N1M1 668 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 TSEN15Q8WW01 171 aaKnown RBP11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 TAAR8Q969N4 342 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 AKAP7Q9P0M2 348 aaPredicted RBP11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 CGGBP1Q9UFW8 167 aaPredicted RBP11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 MLXQ9UH92 298 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 RNF215Q9Y6U7 377 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 CELSR3Q9NYQ7 3312 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 TRAV14DV4A0A0A6YYC5 116 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 DCDC2BA2VCK2 349 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 UTS2O95399 124 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 ABHD16AO95870 558 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 POU3F4P49335 361 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 PSMD4P55036 377 aaKnown RBP11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 ALG10Q5BKT4 473 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 PDSS1Q5T2R2 415 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 KCTD9Q7L273 389 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 GALNT16Q8N428 558 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 OR1J2Q8NGS2 313 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 TSPAN32Q96QS1 320 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 RXFP3Q9NSD7 469 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 PRR13Q9NZ81 148 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 C11orf98E9PRG8 122 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 H3BMH7 237 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 CTDSPLO15194 276 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 B3GALNT1O75752 331 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 GLSO94925 669 aaPredicted RBP11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 CD14P08571 375 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 CBR1P16152 277 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 AVPR2P30518 371 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 FASLGP48023 281 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 PPM1FP49593 454 aaPredicted RBP11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 RPL18Q07020 188 aaKnown RBP11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 DMWDQ09019 674 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 RBMS2Q15434 407 aaKnown RBP11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 SLC22A6Q4U2R8 563 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 SHEQ5VZ18 495 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 OR1S2Q8NGQ3 325 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 LIPHQ8WWY8 451 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 NSMAFQ92636 917 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 ADOQ96SZ5 270 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 SLC19A3Q9BZV2 496 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 NKX6-2Q9C056 277 aaPredicted RBP11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 UBQLN4Q9NRR5 601 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 STEAP1Q9UHE8 339 aa11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 NOP16Q9Y3C1 178 aaKnown RBP11.33□□□□□ -0.6
SFSWAP-208ENST00000539506 DISC1C4P0D8 188 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 EEF1E1-BLOC1S5C9J1V9 151 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 AKR7A3O95154 331 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 ITGA5P08648 1049 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 GRK6P43250 576 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 IL10RAQ13651 578 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 COL13A1Q5TAT6 717 aaPredicted RBP11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 LRRTM1Q86UE6 522 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 RTN4RL2Q86UN3 420 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 TMEM151BQ8IW70 566 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 CLRN3Q8NCR9 226 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 STEAP2Q8NFT2 490 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 LMX1AQ8TE12 382 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 MIB2Q96AX9 1013 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 TSNAXQ99598 290 aaKnown RBP11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 OR8D2Q9GZM6 311 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 SLITRK2Q9H156 845 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 SOHLH2Q9NX45 425 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 PCNX3Q9H6A9 2034 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 MED12Q93074 2177 aa11.32□□□□□ -0.6
SFSWAP-208ENST00000539506 GPRIN2O60269 458 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms