RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 IER3IP1Q9Y5U9 82 aa13.48□□□□□ -0.25
CIT-210ENST00000539413 SNAP29O95721 258 aa13.47□□□□□ -0.25
CIT-210ENST00000539413 ADRA2AP08913 450 aa13.47□□□□□ -0.25
CIT-210ENST00000539413 CST2P09228 141 aa13.47□□□□□ -0.25
CIT-210ENST00000539413 CSF3P09919 207 aa13.47□□□□□ -0.25
CIT-210ENST00000539413 SLC25A16P16260 332 aa13.47□□□□□ -0.25
CIT-210ENST00000539413 CTLA4P16410 223 aa13.47□□□□□ -0.25
CIT-210ENST00000539413 APLNRP35414 380 aa13.47□□□□□ -0.25
CIT-210ENST00000539413 GUCA1AP43080 201 aaPredicted RBP13.47□□□□□ -0.25
CIT-210ENST00000539413 ERVS71-1P61550 626 aa13.47□□□□□ -0.25
CIT-210ENST00000539413 RPS23P62266 143 aaKnown RBP13.47□□□□□ -0.25
CIT-210ENST00000539413 ENDOGQ14249 297 aaKnown RBP13.47□□□□□ -0.25
CIT-210ENST00000539413 TRIM25Q14258 630 aaKnown RBP13.47□□□□□ -0.25
CIT-210ENST00000539413 MTX3Q5HYI7 312 aa13.47□□□□□ -0.25
CIT-210ENST00000539413 GPR139Q6DWJ6 353 aa13.47□□□□□ -0.25
CIT-210ENST00000539413 UGT2A3Q6UWM9 527 aa13.47□□□□□ -0.25
CIT-210ENST00000539413 DPY19L2P2Q6ZN68 376 aa13.47□□□□□ -0.25
CIT-210ENST00000539413 DHFR2Q86XF0 187 aa13.47□□□□□ -0.25
CIT-210ENST00000539413 OR1J2Q8NGS2 313 aa13.47□□□□□ -0.25
CIT-210ENST00000539413 FANK1Q8TC84 345 aa13.47□□□□□ -0.25
CIT-210ENST00000539413 FOXN4Q96NZ1 517 aa13.47□□□□□ -0.25
CIT-210ENST00000539413 SYT4Q9H2B2 425 aa13.47□□□□□ -0.25
CIT-210ENST00000539413 MUC13Q9H3R2 512 aa13.47□□□□□ -0.25
CIT-210ENST00000539413 TPK1Q9H3S4 243 aa13.47□□□□□ -0.25
CIT-210ENST00000539413 EMC7Q9NPA0 242 aa13.47□□□□□ -0.25
CIT-210ENST00000539413 POLE4Q9NR33 117 aa13.47□□□□□ -0.25
CIT-210ENST00000539413 MYEF2Q9P2K5 600 aaKnown RBP13.47□□□□□ -0.25
CIT-210ENST00000539413 PLCE1Q9P212 2302 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 AHCYL1O43865 530 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 PPP1R3DO95685 299 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 MSR1P21757 451 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 CCNOP22674 350 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 FPR3P25089 353 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 STOMP27105 288 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 PCSK6P29122 969 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 MAGEA2P43356 314 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 GSSP48637 474 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 EVX1P49640 407 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 PDLIM4P50479 330 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 RPS6KA3P51812 740 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 MAD2L1BPQ15013 274 aaPredicted RBP13.46□□□□□ -0.25
CIT-210ENST00000539413 CARTPTQ16568 116 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 RFX4Q33E94 735 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 RGS7BPQ6MZT1 257 aaPredicted RBP13.46□□□□□ -0.25
CIT-210ENST00000539413 C1orf94Q6P1W5 598 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 PGBD2Q6P3X8 592 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 PTCHD4Q6ZW05 846 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 TRPM8Q7Z2W7 1104 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 POM121L2Q96KW2 1035 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 ZNF416Q9BWM5 594 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 OR2H1Q9GZK4 316 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 WNT5BQ9H1J7 359 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 C1orf21Q9H246 121 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 LRMDAQ9H2I8 198 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 OR52D1Q9H346 318 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 RERGLQ9H628 205 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 DUSP13Q9UII6 198 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 LYVE1Q9Y5Y7 322 aa13.46□□□□□ -0.25
CIT-210ENST00000539413 LOC100509620A0A075B734 347 aa13.45□□□□□ -0.26
CIT-210ENST00000539413 INAFM1C9JVW0 142 aa13.45□□□□□ -0.26
CIT-210ENST00000539413 M0R233 179 aa13.45□□□□□ -0.26
CIT-210ENST00000539413 TNFRSF11BO00300 401 aa13.45□□□□□ -0.26
CIT-210ENST00000539413 SYNGR3O43761 229 aa13.45□□□□□ -0.26
CIT-210ENST00000539413 SLC16A7O60669 478 aa13.45□□□□□ -0.26
CIT-210ENST00000539413 UBOX5O94941 541 aa13.45□□□□□ -0.26
CIT-210ENST00000539413 TXNDC12O95881 172 aa13.45□□□□□ -0.26
CIT-210ENST00000539413 LCKP06239 509 aa13.45□□□□□ -0.26
CIT-210ENST00000539413 IFNGR2P38484 337 aa13.45□□□□□ -0.26
CIT-210ENST00000539413 CDKN2AP42771 156 aaKnown RBP13.45□□□□□ -0.26
CIT-210ENST00000539413 ALDH3B1P43353 468 aa13.45□□□□□ -0.26
CIT-210ENST00000539413 HMGA2P52926 109 aa13.45□□□□□ -0.26
CIT-210ENST00000539413 UCP2P55851 309 aa13.45□□□□□ -0.26
CIT-210ENST00000539413 LOXL1Q08397 574 aaPredicted RBP13.45□□□□□ -0.26
CIT-210ENST00000539413 PPP1R8Q12972 351 aaKnown RBP13.45□□□□□ -0.26
CIT-210ENST00000539413 OTPQ5XKR4 325 aa13.45□□□□□ -0.26
CIT-210ENST00000539413 ADCK1Q86TW2 530 aa13.45□□□□□ -0.26
CIT-210ENST00000539413 GNPDA2Q8TDQ7 276 aa13.45□□□□□ -0.26
CIT-210ENST00000539413 NEU4Q8WWR8 484 aaPredicted RBP13.45□□□□□ -0.26
CIT-210ENST00000539413 CCDC124Q96CT7 223 aaKnown RBP13.45□□□□□ -0.26
CIT-210ENST00000539413 SAMD8Q96LT4 415 aa13.45□□□□□ -0.26
CIT-210ENST00000539413 ERMAPQ96PL5 475 aaPredicted RBP13.45□□□□□ -0.26
CIT-210ENST00000539413 THTPAQ9BU02 230 aa13.45□□□□□ -0.26
CIT-210ENST00000539413 MAGIXQ9H6Y5 334 aa13.45□□□□□ -0.26
CIT-210ENST00000539413 VSX1Q9NZR4 365 aaPredicted RBP13.45□□□□□ -0.26
CIT-210ENST00000539413 REV1Q9UBZ9 1251 aa13.45□□□□□ -0.26
CIT-210ENST00000539413 COA3Q9Y2R0 106 aaPredicted RBP13.45□□□□□ -0.26
CIT-210ENST00000539413 TIMM10BQ9Y5J6 103 aa13.45□□□□□ -0.26
CIT-210ENST00000539413 CR1P17927 2039 aa13.45□□□□□ -0.26
CIT-210ENST00000539413 MTORP42345 2549 aa13.44□□□□□ -0.26
CIT-210ENST00000539413 A0A1W2PPW3 197 aa13.44□□□□□ -0.26
CIT-210ENST00000539413 LOC390937A0A1W2PQ73 354 aa13.44□□□□□ -0.26
CIT-210ENST00000539413 C5orf49A4QMS7 147 aa13.44□□□□□ -0.26
CIT-210ENST00000539413 C12orf71A8MTZ7 269 aa13.44□□□□□ -0.26
CIT-210ENST00000539413 VWC2LB2RUY7 222 aa13.44□□□□□ -0.26
CIT-210ENST00000539413 NDUFS8O00217 210 aa13.44□□□□□ -0.26
CIT-210ENST00000539413 KHDRBS3O75525 346 aaKnown RBP13.44□□□□□ -0.26
CIT-210ENST00000539413 KRT36O76013 467 aa13.44□□□□□ -0.26
CIT-210ENST00000539413 MPZL1O95297 269 aa13.44□□□□□ -0.26
CIT-210ENST00000539413 CLPTM1O96005 669 aa13.44□□□□□ -0.26
CIT-210ENST00000539413 TP53P04637 393 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms