RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 OMPP47874 163 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 GZMKP49863 264 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 KLF3P57682 345 aaPredicted RBP9.93□□□□□ -0.82
RTN3-209ENST00000538995 ERVK-25P63136 954 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 MRPS11P82912 194 aaKnown RBP9.93□□□□□ -0.82
RTN3-209ENST00000538995 CARTPTQ16568 116 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 SGCAQ16586 387 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 IQCCQ4KMZ1 466 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 MESTQ5EB52 335 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 CYB5R2Q6BCY4 276 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 SYT9Q86SS6 491 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 ADCK1Q86TW2 530 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 MEX3DQ86XN8 651 aaKnown RBP9.93□□□□□ -0.82
RTN3-209ENST00000538995 PAQR4Q8N4S7 273 aaPredicted RBP9.93□□□□□ -0.82
RTN3-209ENST00000538995 UBASH3BQ8TF42 649 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 RSRC1Q96IZ7 334 aaKnown RBP9.93□□□□□ -0.82
RTN3-209ENST00000538995 ZNF570Q96NI8 536 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 FOXN4Q96NZ1 517 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 CDRT15Q96T59 188 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 SYT3Q9BQG1 590 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 BPESC1Q9GZL8 116 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 NRIP3Q9NQ35 241 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 YAE1D1Q9NRH1 226 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 SLCO1C1Q9NYB5 712 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 AURKCQ9UQB9 309 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 ADAM18Q9Y3Q7 739 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 ATRQ13535 2644 aa9.93□□□□□ -0.82
RTN3-209ENST00000538995 A0A1W2PPW3 197 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 SH3PXD2BA1X283 911 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 PRSS37A4D1T9 235 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 C12orf71A8MTZ7 269 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 H3BSA7 217 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 ICMTO60725 284 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 PTP4A3O75365 173 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 TXNDC12O95881 172 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 FAM157BP0CG42 384 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 CCL2P13500 99 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 APEHP13798 732 aaKnown RBP9.92□□□□□ -0.82
RTN3-209ENST00000538995 ZNF23P17027 643 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 STOMP27105 288 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 APEX1P27695 318 aaKnown RBP9.92□□□□□ -0.82
RTN3-209ENST00000538995 LAP3P28838 519 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 ALDH3B1P43353 468 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 UCP2P55851 309 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 PSG4Q00888 419 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 KRR1Q13601 381 aaKnown RBP9.92□□□□□ -0.82
RTN3-209ENST00000538995 GGTLC2Q14390 218 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 SEC23BQ15437 767 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 MOGQ16653 247 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 DPY19L2P2Q6ZN68 376 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 HIPK1Q86Z02 1210 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 ALDH16A1Q8IZ83 802 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 DEFB107AQ8IZN7 70 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 ARHGAP24Q8N264 748 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 CLDN22Q8N7P3 220 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 CPEB3Q8NE35 698 aaKnown RBP9.92□□□□□ -0.82
RTN3-209ENST00000538995 SYNPRQ8TBG9 265 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 SNX33Q8WV41 574 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 C11orf40Q8WZ69 217 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 POM121L2Q96KW2 1035 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 Q96M85 177 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 OR2H1Q9GZK4 316 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 TPK1Q9H3S4 243 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 IL1RAPQ9NPH3 570 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 POLE4Q9NR33 117 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 VSX1Q9NZR4 365 aaPredicted RBP9.92□□□□□ -0.82
RTN3-209ENST00000538995 MYEF2Q9P2K5 600 aaKnown RBP9.92□□□□□ -0.82
RTN3-209ENST00000538995 DUSP13Q9UII6 198 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 TIMM10BQ9Y5J6 103 aa9.92□□□□□ -0.82
RTN3-209ENST00000538995 IGHV4-61A0A0C4DH41 118 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 TEX13CA0A0J9YWL9 993 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 A0A1W2PPL8 197 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 UNC119BA6NIH7 251 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 H7C1C5 153 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 DYNC1I1O14576 645 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 DIRAS1O95057 198 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 GADD45GO95257 159 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 FAM107AO95990 144 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 FABP3P05413 133 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 LCKP06239 509 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 TACSTD2P09758 323 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 COX5BP10606 129 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 FPR3P25089 353 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 IFNGR2P38484 337 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 GDI2P50395 445 aaKnown RBP9.91□□□□□ -0.82
RTN3-209ENST00000538995 RPS6KA3P51812 740 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 LCN6P62502 163 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 MXRA7P84157 204 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 SPIBQ01892 262 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 SCRN3Q0VDG4 424 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 RIN1Q13671 783 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 ENDOGQ14249 297 aaKnown RBP9.91□□□□□ -0.82
RTN3-209ENST00000538995 NKPD1Q17RQ9 610 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 PCGF3Q3KNV8 242 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 MTX3Q5HYI7 312 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 SMARCD3Q6STE5 483 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 LRP11Q86VZ4 500 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 PRIMA1Q86XR5 153 aa9.91□□□□□ -0.82
RTN3-209ENST00000538995 ZCCHC24Q8N2G6 241 aaKnown RBP9.91□□□□□ -0.82
RTN3-209ENST00000538995 HPS1Q92902 700 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms