RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 PAICSP22234 425 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 GRK5P34947 590 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 COMPP49747 757 aaPredicted RBP10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 BIDP55957 195 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 CLDN17P56750 224 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 FXYD6P3P58550 94 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 RAP1BP61224 184 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 RPL27P61353 136 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 RAP1AP62834 184 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 H3F3AP84243 136 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 CDK5Q00535 292 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 IL5RAQ01344 420 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 SLC35F1Q5T1Q4 408 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 SLX4IPQ5VYV7 408 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 FAM205BPQ63HN1 556 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 OR9K2Q8NGE7 335 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 OR4Q3Q8NH05 313 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 RNF128Q8TEB7 428 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 ABHD3Q8WU67 409 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 HTRA1Q92743 480 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 ADAD1Q96M93 576 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 GPX7Q96SL4 187 aaPredicted RBP10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 CACNG6Q9BXT2 260 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 HDHD5Q9BXW7 423 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 NRIP3Q9NQ35 241 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 GLRX2Q9NS18 164 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 KLHL21Q9UJP4 597 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 ZNF346Q9UL40 294 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 RAB26Q9ULW5 256 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 ADAM18Q9Y3Q7 739 aa10.9□□□□□ -0.66
CLSTN3-208ENST00000538933 VWC2LB2RUY7 222 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 ZNF814B7Z6K7 855 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 BHLHE40O14503 412 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 SLC16A6O15403 523 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 RENP00797 406 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 TSPAN19P0C672 248 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 HLA-DOBP13765 273 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 APEHP13798 732 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 EPHA2P29317 976 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 SDHAP31040 664 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 GGT2P36268 569 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 P2RY4P51582 365 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 CLRN1P58418 232 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 IL18R1Q13478 541 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 KRR1Q13601 381 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 FHL1Q13642 323 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 SLC17A1Q14916 467 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 KRT80Q6KB66 452 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 PTCHD4Q6ZW05 846 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 CREB3L2Q70SY1 520 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 AAED1Q7RTV5 226 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 C8orf59Q8N0T1 100 aaPredicted RBP10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 LNX2Q8N448 690 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 LRRC75AQ8NAA5 344 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 OR52E2Q8NGJ4 325 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 HSD17B8Q92506 261 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 FAM168AQ92567 244 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 RASD2Q96D21 266 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 ZMYND19Q96E35 227 aaPredicted RBP10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 HRASLS5Q96KN8 279 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 Q96M85 177 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 TSPAN32Q96QS1 320 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 NGBQ9NPG2 151 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 FANCFQ9NPI8 374 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 MED29Q9NX70 200 aa10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 NOSIPQ9Y314 301 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-208ENST00000538933 LOC102725191A0A1B0GVB3 256 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 M0R3G1 203 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 DLGAP1O14490 977 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 IMPA2O14732 288 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 ARPC3O15145 178 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 TRAF3IP2O43734 574 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 MPZL2O60487 215 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 MRPL33O75394 65 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 KRT33AO76009 404 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 IGHG1P01857 330 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 IGHMP01871 453 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 NR2C1P13056 603 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 HNF1AP20823 631 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 SLC16A1P53985 500 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 CD47Q08722 323 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 ITGADQ13349 1161 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 PDK3Q15120 406 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 SFRP5Q5T4F7 317 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 AGAP6Q5VW22 663 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 CARD17Q5XLA6 110 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 ACSM5Q6NUN0 579 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 NIPAL3Q6P499 406 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 LEG1Q6P5S2 330 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 TCEANCQ8N8B7 351 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 SDR9C7Q8NEX9 313 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 OR6N1Q8NGY5 312 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 OR4K13Q8NH42 304 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 ASB10Q8WXI3 467 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 TFAP2CQ92754 450 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 ZNF566Q969W8 418 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 ZNF775Q96BV0 537 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 TXNDC15Q96J42 360 aa10.88□□□□□ -0.67
CLSTN3-208ENST00000538933 CNBD2Q96M20 576 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms