RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 SLC41A2Q96JW4 573 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 C4orf45Q96LM5 186 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 DCBLD2Q96PD2 775 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 TEX101Q9BY14 249 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 SELENOIQ9C0D9 397 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 CST11Q9H112 138 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 SMCO4Q9NRQ5 59 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 SLC2A8Q9NY64 477 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 OR1A2Q9Y585 309 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 C9orf170A2RU37 121 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 IGLON5A6NGN9 336 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 NKX2-2O95096 273 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 CRHP06850 196 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 ABCD3P28288 659 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 TACR3P29371 465 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 CCKBRP32239 447 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 IL13RA1P78552 427 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 MST1LQ2TV78 715 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 C5orf46Q6UWT4 87 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 LMF1Q96S06 567 aa16.81■□□□□ 0.28
SFSWAP-207ENST00000538548 TRBV6-7A0A0A0MS04 114 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 HSPB2A8KAH6 182 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 PRRT4C9JH25 899 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 KCNAB3O43448 404 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 AVPR2P30518 371 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 HSPB2Q16082 182 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 PRICKLE4Q2TBC4 344 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 CNKSR3Q6P9H4 555 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 OR10R2Q8NGX6 335 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 SLC22A8Q8TCC7 542 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 TIMM29Q9BSF4 260 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 RHOFQ9HBH0 211 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 CHMP1AQ9HD42 196 aaPredicted RBP16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 CYTL1Q9NRR1 136 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 TMEM74BQ9NUR3 256 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 LPAR3Q9UBY5 353 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 FAM96BQ9Y3D0 163 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 SMIM10L1P0DMW3 83 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 KIR3DL2P43630 455 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 ADAM8P78325 824 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 MESP2Q0VG99 397 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 PAPD4Q6PIY7 484 aaKnown RBP16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 RHOUQ7L0Q8 258 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 DCUN1D4Q92564 292 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 SMIM10Q96HG1 83 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 WDR76Q9H967 626 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 CSAG2Q9Y5P2 127 aa16.8■□□□□ 0.28
SFSWAP-207ENST00000538548 TBC1D3IA0A087WXS9 549 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 EEF1E1-BLOC1S5C9J1V9 151 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 FGF17O60258 216 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 MUC1P15941 1255 aaPredicted RBP16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 CBR1P16152 277 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 ALOX5APP20292 161 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 AQP2P41181 271 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 CAV2P51636 162 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 FAHD2BQ6P2I3 314 aaPredicted RBP16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 NAA40Q86UY6 237 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 ZDHHC22Q8N966 263 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 SMARCD2Q92925 531 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 RAB7BQ96AH8 199 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 CPNE2Q96FN4 548 aaPredicted RBP16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 FAHD2AQ96GK7 314 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 TOX2Q96NM4 488 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 KLK13Q9UKR3 277 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 SLC27A6Q9Y2P4 619 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 HCFC2Q9Y5Z7 792 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 A0A0B4J2A0 478 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 TVP23AA6NH52 213 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 GATCO43716 136 aaKnown RBP16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 ADH5P11766 374 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 APEHP13798 732 aaKnown RBP16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 SDHAP31040 664 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 MGAT2Q10469 447 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 PRRT3Q5FWE3 981 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 WDR38Q5JTN6 314 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 ZNF584Q8IVC4 421 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 PLPP7Q8NBV4 271 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 OR6N2Q8NGY6 317 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 NUDCD2Q8WVJ2 157 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 SEC61A2Q9H9S3 476 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 CAPN10Q9HC96 672 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 SRA1Q9HD15 236 aaKnown RBP16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 MIOXQ9UGB7 285 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 SHPKQ9UHJ6 478 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 TMEM14AQ9Y6G1 99 aa16.79■□□□□ 0.28
SFSWAP-207ENST00000538548 A0A0A6YYH2 397 aa16.78■□□□□ 0.28
SFSWAP-207ENST00000538548 A6NJ64 397 aa16.78■□□□□ 0.28
SFSWAP-207ENST00000538548 DCTN6O00399 190 aa16.78■□□□□ 0.28
SFSWAP-207ENST00000538548 CSN2P05814 226 aa16.78■□□□□ 0.28
SFSWAP-207ENST00000538548 CT62P0C5K7 136 aa16.78■□□□□ 0.28
SFSWAP-207ENST00000538548 ZNF44P15621 663 aa16.78■□□□□ 0.28
SFSWAP-207ENST00000538548 SKP1P63208 163 aa16.78■□□□□ 0.28
SFSWAP-207ENST00000538548 NKPD1Q17RQ9 610 aa16.78■□□□□ 0.28
SFSWAP-207ENST00000538548 HYAL4Q2M3T9 481 aa16.78■□□□□ 0.28
SFSWAP-207ENST00000538548 FCRL6Q6DN72 434 aa16.78■□□□□ 0.28
SFSWAP-207ENST00000538548 DPY19L4Q7Z388 723 aa16.78■□□□□ 0.28
SFSWAP-207ENST00000538548 PHOSPHO1Q8TCT1 267 aa16.78■□□□□ 0.28
SFSWAP-207ENST00000538548 HDAC8Q9BY41 377 aa16.78■□□□□ 0.28
SFSWAP-207ENST00000538548 BCL2L14Q9BZR8 327 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms