RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 NKD1Q969G9 470 aa12.58□□□□□ -0.4
ACTN1-205ENST00000538545 SIAEQ9HAT2 523 aa12.58□□□□□ -0.4
ACTN1-205ENST00000538545 EXTL2Q9UBQ6 330 aa12.58□□□□□ -0.4
ACTN1-205ENST00000538545 KIAA1549Q9HCM3 1950 aa12.58□□□□□ -0.4
ACTN1-205ENST00000538545 LMX1BO60663 402 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 IGHEP01854 428 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 UCHL1P09936 223 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 SUCLG1P53597 346 aaKnown RBP12.57□□□□□ -0.4
ACTN1-205ENST00000538545 SLC17A1Q14916 467 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 SLC18B1Q6NT16 456 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 LRFN4Q6PJG9 635 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 CADM3Q8N126 398 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 OR4M1Q8NGD0 313 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 ROBO4Q8WZ75 1007 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 MIB2Q96AX9 1013 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 ZBTB8AQ96BR9 441 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 ZNF837Q96EG3 531 aaPredicted RBP12.57□□□□□ -0.4
ACTN1-205ENST00000538545 EMC9Q9Y3B6 208 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 A0A1W2PQ72 361 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 STMND1H3BQB6 276 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 WDPCPO95876 746 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 TACSTD2P09758 323 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 PGA4P0DJD7 388 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 PGA3P0DJD8 388 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 ICAM2P13598 275 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 ZNF823P16415 610 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 ADRA2CP18825 462 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 CRABP1P29762 137 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 EVX1P49640 407 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 CSRP2Q16527 193 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 CCDC58Q4VC31 144 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 DMRTC1Q5HYR2 192 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 UTS2BQ765I0 119 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 SERPINA12Q8IW75 414 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 TMEM106AQ96A25 262 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 MRPL13Q9BYD1 178 aaKnown RBP12.57□□□□□ -0.4
ACTN1-205ENST00000538545 KCNK15Q9H427 330 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 MRPS7Q9Y2R9 242 aaKnown RBP12.57□□□□□ -0.4
ACTN1-205ENST00000538545 CBR3O75828 277 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 NEURL1O76050 574 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 GAAP10253 952 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 SLC2A1P11166 492 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 EPXP11678 715 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 GDF1P27539 372 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 NTF4P34130 210 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 EIF1P41567 113 aaKnown RBP12.57□□□□□ -0.4
ACTN1-205ENST00000538545 BCAP31P51572 246 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 PLA2G7Q13093 441 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 CCBE1Q6UXH8 406 aaPredicted RBP12.57□□□□□ -0.4
ACTN1-205ENST00000538545 PIP4P1Q86T03 277 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 ZNF679Q8IYX0 411 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 ADAMTS17Q8TE56 1095 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 SACM1LQ9NTJ5 587 aa12.57□□□□□ -0.4
ACTN1-205ENST00000538545 MYO7BQ6PIF6 2116 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 FAM166BA8MTA8 275 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 LANCL1O43813 399 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 QDPRP09417 244 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 GALP22466 123 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 SELENOPP49908 381 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 B3GALT5-AS1P59052 145 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 PPP3R1P63098 170 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 H3F3CQ6NXT2 135 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 CFAP77Q6ZQR2 320 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 ST7LQ8TDW4 575 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 MCHR2Q969V1 340 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 ZNF845Q96IR2 970 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-205ENST00000538545 SGCZQ96LD1 299 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 C4orf45Q96LM5 186 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 CSAG2Q9Y5P2 127 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 A0A1W2PNV4 684 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 AQP7P3A6NL99 342 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 TFECO14948 347 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-205ENST00000538545 PTHLHP12272 177 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 PTGS2P35354 604 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 CLDN15P56746 228 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 SRYQ05066 204 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 Q8N402 240 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 OR10S1Q8NGN2 331 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 OR52N5Q8NH56 324 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 RPS4Y2Q8TD47 263 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 ADAMTS14Q8WXS8 1223 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 TTYH2Q9BSA4 534 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 MMP28Q9H239 520 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 PPP1R3EQ9H7J1 279 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 TMEM14AQ9Y6G1 99 aa12.56□□□□□ -0.4
ACTN1-205ENST00000538545 A6NIZ1 184 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 ARGFXA6NJG6 315 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 ADH6P28332 368 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 RFX2P48378 723 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 RAP1BP61224 184 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 RAP1AP62834 184 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 EGR3Q06889 387 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 TRAM1Q15629 374 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 HYAL4Q2M3T9 481 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 ASPHD2Q6ICH7 369 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 UNQ9370/PRO34162Q6UXP9 181 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 ARMC10Q8N2F6 343 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 OR6S1Q8NH40 331 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 LGALS14Q8TCE9 139 aa12.55□□□□□ -0.4
ACTN1-205ENST00000538545 TSEN15Q8WW01 171 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms