RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.25■□□□□ 0.99
HMGA2-208ENST00000537429 SH3D21A4FU49 640 aa21.24■□□□□ 0.99
HMGA2-208ENST00000537429 HLA-DQA2P01906 255 aa21.24■□□□□ 0.99
HMGA2-208ENST00000537429 HRGP04196 525 aa21.24■□□□□ 0.99
HMGA2-208ENST00000537429 OR8G3PP0DMU2 310 aa21.24■□□□□ 0.99
HMGA2-208ENST00000537429 MSR1P21757 451 aa21.24■□□□□ 0.99
HMGA2-208ENST00000537429 TFF3Q07654 80 aa21.24■□□□□ 0.99
HMGA2-208ENST00000537429 TMED1Q13445 227 aa21.24■□□□□ 0.99
HMGA2-208ENST00000537429 FAM27BQ5VT28 67 aa21.24■□□□□ 0.99
HMGA2-208ENST00000537429 KLHL24Q6TFL4 600 aa21.24■□□□□ 0.99
HMGA2-208ENST00000537429 BHLHA15Q7RTS1 189 aaPredicted RBP21.24■□□□□ 0.99
HMGA2-208ENST00000537429 A0A096LPE4 126 aa21.24■□□□□ 0.99
HMGA2-208ENST00000537429 A0A1W2PPZ6 126 aa21.24■□□□□ 0.99
HMGA2-208ENST00000537429 TVP23AA6NH52 213 aa21.24■□□□□ 0.99
HMGA2-208ENST00000537429 SNTNA6NMZ2 147 aa21.24■□□□□ 0.99
HMGA2-208ENST00000537429 IL32P24001 234 aa21.24■□□□□ 0.99
HMGA2-208ENST00000537429 UGT2B10P36537 528 aa21.24■□□□□ 0.99
HMGA2-208ENST00000537429 GGTLC2Q14390 218 aa21.24■□□□□ 0.99
HMGA2-208ENST00000537429 MEP1BQ16820 701 aa21.24■□□□□ 0.99
HMGA2-208ENST00000537429 TBRG1Q3YBR2 411 aa21.24■□□□□ 0.99
HMGA2-208ENST00000537429 LCN1P1Q5VSP4 162 aa21.24■□□□□ 0.99
HMGA2-208ENST00000537429 OTPQ5XKR4 325 aa21.24■□□□□ 0.99
HMGA2-208ENST00000537429 UGT2A3Q6UWM9 527 aa21.24■□□□□ 0.99
HMGA2-208ENST00000537429 SSC4DQ8WTU2 575 aa21.24■□□□□ 0.99
HMGA2-208ENST00000537429 PCDHGB5Q9Y5G0 923 aa21.24■□□□□ 0.99
HMGA2-208ENST00000537429 COMMD3-BMI1R4GMX3 469 aa21.24■□□□□ 0.99
HMGA2-208ENST00000537429 CLEC18AA5D8T8 446 aa21.23■□□□□ 0.99
HMGA2-208ENST00000537429 C16orf97H3BN30 126 aa21.23■□□□□ 0.99
HMGA2-208ENST00000537429 RNF224P0DH78 156 aa21.23■□□□□ 0.99
HMGA2-208ENST00000537429 CCKARP32238 428 aa21.23■□□□□ 0.99
HMGA2-208ENST00000537429 NUDT6P53370 316 aa21.23■□□□□ 0.99
HMGA2-208ENST00000537429 LSM6P62312 80 aaKnown RBP21.23■□□□□ 0.99
HMGA2-208ENST00000537429 HIKESHIQ53FT3 197 aa21.23■□□□□ 0.99
HMGA2-208ENST00000537429 CLEC18BQ6UXF7 455 aa21.23■□□□□ 0.99
HMGA2-208ENST00000537429 SKA3Q8IX90 412 aa21.23■□□□□ 0.99
HMGA2-208ENST00000537429 TIGD4Q8IY51 512 aa21.23■□□□□ 0.99
HMGA2-208ENST00000537429 C17orf78Q8N4C9 275 aa21.23■□□□□ 0.99
HMGA2-208ENST00000537429 CLEC18CQ8NCF0 446 aa21.23■□□□□ 0.99
HMGA2-208ENST00000537429 SH3GL3Q99963 347 aa21.23■□□□□ 0.99
HMGA2-208ENST00000537429 WDR76Q9H967 626 aa21.23■□□□□ 0.99
HMGA2-208ENST00000537429 EMC7Q9NPA0 242 aa21.23■□□□□ 0.99
HMGA2-208ENST00000537429 FLNCQ14315 2725 aa21.22■□□□□ 0.99
HMGA2-208ENST00000537429 FARS2O95363 451 aaKnown RBP21.22■□□□□ 0.99
HMGA2-208ENST00000537429 MTNR1AP48039 350 aa21.22■□□□□ 0.99
HMGA2-208ENST00000537429 MED21Q13503 144 aa21.22■□□□□ 0.99
HMGA2-208ENST00000537429 C6orf141Q5SZD1 244 aa21.22■□□□□ 0.99
HMGA2-208ENST00000537429 KRT80Q6KB66 452 aa21.22■□□□□ 0.99
HMGA2-208ENST00000537429 LRRC18Q8N456 261 aa21.22■□□□□ 0.99
HMGA2-208ENST00000537429 STEAP2Q8NFT2 490 aa21.22■□□□□ 0.99
HMGA2-208ENST00000537429 OR10A4Q9H209 315 aa21.22■□□□□ 0.99
HMGA2-208ENST00000537429 AMBNQ9NP70 447 aa21.22■□□□□ 0.99
HMGA2-208ENST00000537429 UBAP1Q9NZ09 502 aa21.22■□□□□ 0.99
HMGA2-208ENST00000537429 ADGRG4Q8IZF6 3080 aa21.22■□□□□ 0.99
HMGA2-208ENST00000537429 DBTP11182 482 aaKnown RBP21.21■□□□□ 0.99
HMGA2-208ENST00000537429 HOXB1P14653 301 aaPredicted RBP21.21■□□□□ 0.99
HMGA2-208ENST00000537429 ZNF91Q05481 1191 aa21.21■□□□□ 0.99
HMGA2-208ENST00000537429 ENDOGQ14249 297 aaKnown RBP21.21■□□□□ 0.99
HMGA2-208ENST00000537429 ZSCAN2Q7Z7L9 614 aaPredicted RBP21.21■□□□□ 0.99
HMGA2-208ENST00000537429 S100PBPQ96BU1 408 aa21.21■□□□□ 0.99
HMGA2-208ENST00000537429 INTS14Q96SY0 518 aa21.21■□□□□ 0.99
HMGA2-208ENST00000537429 USB1Q9BQ65 265 aaKnown RBP21.21■□□□□ 0.99
HMGA2-208ENST00000537429 ZNF416Q9BWM5 594 aa21.21■□□□□ 0.99
HMGA2-208ENST00000537429 SLC17A5Q9NRA2 495 aa21.21■□□□□ 0.99
HMGA2-208ENST00000537429 ZNF224Q9NZL3 707 aa21.21■□□□□ 0.99
HMGA2-208ENST00000537429 RPL36Q9Y3U8 105 aaKnown RBP21.21■□□□□ 0.99
HMGA2-208ENST00000537429 OR5H1A6NKK0 313 aa21.2■□□□□ 0.98
HMGA2-208ENST00000537429 CST2P09228 141 aa21.2■□□□□ 0.98
HMGA2-208ENST00000537429 ZNF823P16415 610 aa21.2■□□□□ 0.98
HMGA2-208ENST00000537429 CXCR4P61073 352 aa21.2■□□□□ 0.98
HMGA2-208ENST00000537429 ADAM8P78325 824 aa21.2■□□□□ 0.98
HMGA2-208ENST00000537429 PCK2Q16822 640 aa21.2■□□□□ 0.98
HMGA2-208ENST00000537429 TEX30Q5JUR7 227 aa21.2■□□□□ 0.98
HMGA2-208ENST00000537429 SLC16A14Q7RTX9 510 aa21.2■□□□□ 0.98
HMGA2-208ENST00000537429 ERI1Q8IV48 349 aaKnown RBP21.2■□□□□ 0.98
HMGA2-208ENST00000537429 CCDC36Q8IYA8 594 aa21.2■□□□□ 0.98
HMGA2-208ENST00000537429 WDR31Q8NA23 367 aa21.2■□□□□ 0.98
HMGA2-208ENST00000537429 OR10H5Q8NGA6 315 aa21.2■□□□□ 0.98
HMGA2-208ENST00000537429 RNFT2Q96EX2 444 aa21.2■□□□□ 0.98
HMGA2-208ENST00000537429 ACTR6Q9GZN1 396 aa21.2■□□□□ 0.98
HMGA2-208ENST00000537429 ADGRL4Q9HBW9 690 aa21.2■□□□□ 0.98
HMGA2-208ENST00000537429 PLCXD1Q9NUJ7 323 aa21.2■□□□□ 0.98
HMGA2-208ENST00000537429 MRPS18AQ9NVS2 196 aaKnown RBP21.2■□□□□ 0.98
HMGA2-208ENST00000537429 SPTBN1Q01082 2364 aaKnown RBP21.2■□□□□ 0.98
HMGA2-208ENST00000537429 ZNF593O00488 134 aaPredicted RBP21.19■□□□□ 0.98
HMGA2-208ENST00000537429 SELENOFO60613 162 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 SBK2P0C263 348 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 GRNP28799 593 aaKnown RBP21.19■□□□□ 0.98
HMGA2-208ENST00000537429 HOXC12P31275 282 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 ENTPD1P49961 510 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 TIMM23BQ5SRD1 257 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 P2RY8Q86VZ1 359 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 OR51G2Q8NGK0 314 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 FGFBP3Q8TAT2 258 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 FBXO17Q96EF6 278 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 CYB5R1Q9UHQ9 305 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 KCNG2Q9UJ96 466 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 HCFC1P51610 2035 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 ARPC4-TTLL3A0A0A6YYG9 625 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 ZNF503-AS2A6NEH8 195 aa21.19■□□□□ 0.98
HMGA2-208ENST00000537429 MRPL3P09001 348 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms