RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 HKR1P10072 659 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 CALCBP10092 127 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 RAB6AP20340 208 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 CD70P32970 193 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 SLBPQ14493 270 aaKnown RBP eCLIP9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 COMMD1Q8N668 190 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 KLK6Q92876 244 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 FGF11Q92914 225 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 HAVCR1Q96D42 359 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 SEMA6CQ9H3T2 930 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 DNAJB11Q9UBS4 358 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 IFITM10A6NMD0 228 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 DVL1O14640 695 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 NT5EP21589 574 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 STXBP1P61764 594 aaKnown RBP9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 CYCSP99999 105 aaKnown RBP9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 ZNF763Q0D2J5 394 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 UBE2V2Q15819 145 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 DCAF10Q5QP82 559 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 LY6G6FQ5SQ64 297 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 TMEM164Q5U3C3 297 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 PNLDC1Q8NA58 520 aaKnown RBP9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 ADPRHL1Q8NDY3 354 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 OR8S1Q8NH09 359 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 SNIP1Q8TAD8 396 aaKnown RBP9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 RSC1A1Q92681 617 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 IP6K3Q96PC2 410 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 PHB2Q99623 299 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 PBDC1Q9BVG4 233 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 MFRPQ9BY79 579 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 A4GALTQ9NPC4 353 aa9.91□□□□□ -0.82
CLSTN3-207ENST00000537408 SLC22A31A6NKX4 558 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 EEF1E1-BLOC1S5C9J1V9 151 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 H7C417 338 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 ITGB1BP1O14713 200 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 HLA-AP01891 365 aaKnown RBP9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 ACTBP60709 375 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 ACTG1P63261 375 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 HNRNPA1L2Q32P51 320 aaKnown RBP9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 ABLIM2Q6H8Q1 611 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 TMEM205Q6UW68 189 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 ERN2Q76MJ5 926 aaKnown RBP9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 BBS1Q8NFJ9 593 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 UBE2E3Q969T4 207 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 ZNF385AQ96PM9 386 aaKnown RBP9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 DERL3Q96Q80 235 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 TMEM9BQ9NQ34 198 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 MTFP1Q9UDX5 166 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 SLC22A14Q9Y267 594 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 IFITM5A6NNB3 132 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 CCSO14618 274 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 CIDEAO60543 219 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 RAC2P15153 192 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 MPZP25189 248 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 CARD18P57730 90 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 HSD11B2P80365 405 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 HEPN1Q6WQI6 88 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 FAM83CQ9BQN1 747 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 ACTRT3Q9BYD9 372 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 A4GNTQ9UNA3 340 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 V9GY05 133 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 ANK1P16157 1881 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 CDHR4A6H8M9 788 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 M0R3H8 397 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 C8GP07360 202 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 CTSLP07711 333 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 RPS21P63220 83 aaKnown RBP9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 HGFACQ04756 655 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 ISXQ2M1V0 245 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 FAM199XQ6PEV8 388 aaPredicted RBP9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 CRIPAKQ8N1N5 446 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 RNF175Q8N4F7 328 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 GPR32P1Q8NGA4 272 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 FAM46AQ96IP4 442 aaKnown RBP9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 SMIM8Q96KF7 97 aa9.9□□□□□ -0.82
CLSTN3-207ENST00000537408 SYT7O43581 403 aa9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 PRICKLE3O43900 615 aaPredicted RBP9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 NSA2O95478 260 aaKnown RBP9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 GBAP04062 536 aa9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 NR2F1P10589 423 aa9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 ITPKBP27987 946 aa9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 PSMB6P28072 239 aa9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 BUD31P41223 144 aaPredicted RBP9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 TDGF1P3P51864 188 aa9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 IHHQ14623 411 aa9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 RIPPLY2Q5TAB7 128 aa9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 ARHGAP11AQ6P4F7 1023 aa9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 CPEB3Q8NE35 698 aaKnown RBP9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 OR13C3Q8NGS6 347 aa9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 OR13C5Q8NGS8 318 aa9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 C16orf78Q8WTQ4 265 aa9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 SLC38A5Q8WUX1 472 aa9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 SLC41A3Q96GZ6 507 aa9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 MRGPRX4Q96LA9 322 aa9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 AMDHD1Q96NU7 426 aa9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 FKRPQ9H9S5 495 aa9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 PARP11Q9NR21 331 aa9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 CNIH4Q9P003 139 aa9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 B4GALT6Q9UBX8 382 aa9.9□□□□□ -0.83
CLSTN3-207ENST00000537408 PRODH2Q9UF12 536 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms