RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 RAB25P57735 213 aa8.33□□□□□ -1.08
UBE3B-207ENST00000537063 CD83Q01151 205 aa8.33□□□□□ -1.08
UBE3B-207ENST00000537063 FMODQ06828 376 aa8.33□□□□□ -1.08
UBE3B-207ENST00000537063 MYBPHQ13203 477 aa8.33□□□□□ -1.08
UBE3B-207ENST00000537063 TOMM20Q15388 145 aa8.33□□□□□ -1.08
UBE3B-207ENST00000537063 C3orf33Q6P1S2 294 aa8.33□□□□□ -1.08
UBE3B-207ENST00000537063 ZNF227Q86WZ6 799 aa8.33□□□□□ -1.08
UBE3B-207ENST00000537063 WDSUB1Q8N9V3 476 aa8.33□□□□□ -1.08
UBE3B-207ENST00000537063 CAPSLQ8WWF8 208 aa8.33□□□□□ -1.08
UBE3B-207ENST00000537063 S100A16Q96FQ6 103 aaKnown RBP8.33□□□□□ -1.08
UBE3B-207ENST00000537063 FOXN4Q96NZ1 517 aa8.33□□□□□ -1.08
UBE3B-207ENST00000537063 ULBP3Q9BZM4 244 aa8.33□□□□□ -1.08
UBE3B-207ENST00000537063 SLC17A5Q9NRA2 495 aa8.33□□□□□ -1.08
UBE3B-207ENST00000537063 DDX28Q9NUL7 540 aaKnown RBP8.33□□□□□ -1.08
UBE3B-207ENST00000537063 NUDT15Q9NV35 164 aa8.33□□□□□ -1.08
UBE3B-207ENST00000537063 MCUBQ9NWR8 336 aa8.33□□□□□ -1.08
UBE3B-207ENST00000537063 ANKRD20A5PA0PJZ0 165 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 ANXA2P2A6NMY6 339 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 LAMTOR5O43504 91 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 KLF7O75840 302 aaPredicted RBP8.32□□□□□ -1.08
UBE3B-207ENST00000537063 MPZL1O95297 269 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 ECDO95905 644 aaPredicted RBP8.32□□□□□ -1.08
UBE3B-207ENST00000537063 ANXA2P07355 339 aaKnown RBP8.32□□□□□ -1.08
UBE3B-207ENST00000537063 CDK2P24941 298 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 GZMKP49863 264 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 POU3F1Q03052 451 aaPredicted RBP8.32□□□□□ -1.08
UBE3B-207ENST00000537063 FAM69BQ5VUD6 431 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 OTPQ5XKR4 325 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 KRT77Q7Z794 578 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 TMPRSS12Q86WS5 348 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 DNAAF1Q8NEP3 725 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 OR2I1PQ8NGU4 316 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 OR52I2Q8NH67 350 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 DEDD2Q8WXF8 326 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 OR2M2Q96R28 347 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 METTL7AQ9H8H3 244 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 SH2D2AQ9NP31 389 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 RYDENQ9NUL5 291 aaKnown RBP8.32□□□□□ -1.08
UBE3B-207ENST00000537063 EMC3Q9P0I2 261 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 SLC22A13Q9Y226 551 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 RPH3AQ9Y2J0 694 aaPredicted RBP8.32□□□□□ -1.08
UBE3B-207ENST00000537063 LOC102725191A0A1B0GVB3 256 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 NAP1L6A6NFF2 107 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 PATE3B3GLJ2 98 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 SHISA8B8ZZ34 492 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 GDF9O60383 454 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 KHDRBS3O75525 346 aaKnown RBP8.32□□□□□ -1.08
UBE3B-207ENST00000537063 GLSO94925 669 aaPredicted RBP8.32□□□□□ -1.08
UBE3B-207ENST00000537063 GSTT2P0CG29 244 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 GSTT2BP0CG30 244 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 ERP29P30040 261 aaKnown RBP8.32□□□□□ -1.08
UBE3B-207ENST00000537063 GPR85P60893 370 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 KDM8Q8N371 416 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 AGBL5Q8NDL9 886 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 RNF133Q8WVZ7 376 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 ASB5Q8WWX0 329 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 SLC25A28Q96A46 364 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 GTPBP2Q9BX10 602 aaKnown RBP8.32□□□□□ -1.08
UBE3B-207ENST00000537063 DEFB126Q9BYW3 111 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 FBXL2Q9UKC9 423 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 FREM3P0C091 2139 aa8.32□□□□□ -1.08
UBE3B-207ENST00000537063 H0YC42 278 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 SLC17A2O00624 439 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 KRT33AO76009 404 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 DHFRP00374 187 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 ACHEP22303 614 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 FKBP2P26885 142 aaKnown RBP8.31□□□□□ -1.08
UBE3B-207ENST00000537063 GIFP27352 417 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 DCTDP32321 178 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 RGS19P49795 217 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 TAS2R20P59543 309 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 C19orf57Q0VDD7 668 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 GSG1Q2KHT4 349 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 BCL2L15Q5TBC7 163 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 ANKRD16Q6P6B7 361 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 SEZ6L2Q6UXD5 910 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 LINGO2Q7L985 606 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 MDGA2Q7Z553 956 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 LYPD6Q86Y78 171 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 M1APQ8TC57 530 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 ZFAND1Q8TCF1 268 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 SLC25A43Q8WUT9 341 aaPredicted RBP8.31□□□□□ -1.08
UBE3B-207ENST00000537063 UTP23Q9BRU9 249 aaKnown RBP8.31□□□□□ -1.08
UBE3B-207ENST00000537063 CACNG6Q9BXT2 260 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 BEX2Q9BXY8 128 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 MED29Q9NX70 200 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 ING3Q9NXR8 418 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 MRPS7Q9Y2R9 242 aaKnown RBP8.31□□□□□ -1.08
UBE3B-207ENST00000537063 RALGAPA1Q6GYQ0 2036 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 XRCC3O43542 346 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 TRAF3IP2O43734 574 aaPredicted RBP8.31□□□□□ -1.08
UBE3B-207ENST00000537063 MT-ND4P03905 459 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 PGA4P0DJD7 388 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 PGA3P0DJD8 388 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 FAPQ12884 760 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 PLA2G7Q13093 441 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 EXT1Q16394 746 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 NDUFA5Q16718 116 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 TMEM69Q5SWH9 247 aa8.31□□□□□ -1.08
UBE3B-207ENST00000537063 CD276Q5ZPR3 534 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms