RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 CTHP32929 405 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 CSNK1DP48730 415 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 NPY4RP50391 375 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 DVL1P1P54792 670 aaPredicted RBP4.95□□□□□ -1.62
PTPRD-213ENST00000537002 HTD2P86397 168 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 CRMP1Q14194 572 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 MBOAT2Q6ZWT7 520 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 GDF7Q7Z4P5 450 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 GABRG1Q8N1C3 465 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 UBAC2Q8NBM4 344 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 OR1S2Q8NGQ3 325 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 TMEM40Q8WWA1 233 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 POM121Q96HA1 1249 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 TNFRSF13CQ96RJ3 184 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 ADAT1Q9BUB4 502 aaKnown RBP4.95□□□□□ -1.62
PTPRD-213ENST00000537002 DNAJB11Q9UBS4 358 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 ADAM29Q9UKF5 820 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 TNFSF18Q9UNG2 199 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 NTNG1Q9Y2I2 539 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 ZSWIM8A7E2V4 1837 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 PDCD11Q14690 1871 aaKnown RBP4.95□□□□□ -1.62
PTPRD-213ENST00000537002 ANTXRLA6NF34 631 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 IGF2P01344 180 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 OPRD1P41143 372 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 ACTR1BP42025 376 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 ACTR1AP61163 376 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 TEAD2Q15562 447 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 FAM27D1Q5T7N8 215 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 TMEM64Q6YI46 380 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF836Q6ZNA1 936 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF695Q8IW36 515 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 MMP21Q8N119 569 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 ASB11Q8WXH4 323 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 JSRP1Q96MG2 331 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-213ENST00000537002 SLC6A18Q96N87 628 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 MS4A4EQ96PG1 132 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 PELI2Q9HAT8 420 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 EHFQ9NZC4 300 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 DEC1Q9P2X7 70 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 SLC35A3Q9Y2D2 325 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 INSL6Q9Y581 213 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 HEBP2Q9Y5Z4 205 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 KCNE1BA0A087WTH5 132 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 CPED1A4D0V7 1026 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 OR4E1P0C645 316 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 PSMB5P28074 263 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 CDX1P47902 265 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-213ENST00000537002 CTSCP53634 463 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 ZP1P60852 638 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 ADIRFQ15847 76 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 Q6ZTK2 550 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF761Q86XN6 746 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-213ENST00000537002 MFSD9Q8NBP5 474 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 OR9A4Q8NGU2 314 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 NMNAT3Q96T66 252 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 MARCH5Q9NX47 278 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 NCDNQ9UBB6 729 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 PIGBOS1A0A0B4J2F0 54 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 CD3DP04234 171 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 FURINP09958 794 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 IMPA1P29218 277 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 P2RX1P51575 399 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 CLRN1P58418 232 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 IAH1Q2TAA2 248 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-213ENST00000537002 EOGTQ5NDL2 527 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 SULF2Q8IWU5 870 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 TTC9BQ8N6N2 239 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 M1APQ8TC57 530 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 TMEM106AQ96A25 262 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 ASB16Q96NS5 453 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 A0A1W2PPH5 198 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 PMS2P1A4D2B8 440 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 SLC31A1O15431 190 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 PNPP00491 289 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 EFNB1P98172 346 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 SRSF5Q13243 272 aaKnown RBP4.94□□□□□ -1.62
PTPRD-213ENST00000537002 C11orf87Q6NUJ2 197 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 KCNIP4Q6PIL6 250 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 MAMDC2Q7Z304 686 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF687Q8N1G0 1237 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF619Q8N2I2 560 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 PLPP7Q8NBV4 271 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 SMIM19Q96E16 107 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 MS4A4AQ96JQ5 239 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 IGFLR1Q9H665 355 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF442Q9H7R0 627 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.94□□□□□ -1.62
PTPRD-213ENST00000537002 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.94□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF230Q9UIE0 474 aaPredicted RBP4.94□□□□□ -1.62
PTPRD-213ENST00000537002 PHIPQ8WWQ0 1821 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 PYCARD-AS1I3L0S3 204 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 STC2O76061 302 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 MAKP20794 623 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 GABRR1P24046 479 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 GATMP50440 423 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 SUCLG1P53597 346 aaKnown RBP4.94□□□□□ -1.62
PTPRD-213ENST00000537002 PCBP4P57723 403 aaKnown RBP4.94□□□□□ -1.62
PTPRD-213ENST00000537002 TMEM41BQ5BJD5 291 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 VITQ6UXI7 678 aa4.94□□□□□ -1.62
PTPRD-213ENST00000537002 VRK3Q8IV63 474 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms