RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 CXorf21Q9HAI6 301 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 FOLH1BQ9HBA9 442 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 CDH20Q9HBT6 801 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 C20orf96Q9NUD7 363 aaPredicted RBP4.35□□□□□ -1.71
CLIP1-207ENST00000536634 TAS2R13Q9NYV9 303 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 DKKL1Q9UK85 242 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 PTBP2Q9UKA9 531 aaKnown RBP4.35□□□□□ -1.71
CLIP1-207ENST00000536634 ZNF175Q9Y473 711 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 SMAD5-AS1Q9Y6J3 95 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 COL7A1Q02388 2944 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 EPPK1P58107 5090 aaKnown RBP4.34□□□□□ -1.71
CLIP1-207ENST00000536634 TMEM89A2RUT3 159 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 NCF1BA6NI72 391 aaPredicted RBP4.34□□□□□ -1.71
CLIP1-207ENST00000536634 NCF1CA8MVU1 366 aaPredicted RBP4.34□□□□□ -1.71
CLIP1-207ENST00000536634 E7EQL1 145 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 GOLGA8MH3BSY2 632 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 AP3B1O00203 1094 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 PLPP1O14494 284 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 SOCS3O14543 225 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 TAPBPO15533 448 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 SS18L1O75177 396 aaPredicted RBP4.34□□□□□ -1.71
CLIP1-207ENST00000536634 CDH16O75309 829 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 NME6O75414 186 aaPredicted RBP4.34□□□□□ -1.71
CLIP1-207ENST00000536634 TGFAP01135 160 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 CSN3P07498 182 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 CCDC175P0C221 793 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 NCF1P14598 390 aaPredicted RBP4.34□□□□□ -1.71
CLIP1-207ENST00000536634 GATA1P15976 413 aaPredicted RBP4.34□□□□□ -1.71
CLIP1-207ENST00000536634 EPORP19235 508 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 KCNJ1P48048 391 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 ALDH3A2P51648 485 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 XGP55808 180 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 TGM3Q08188 693 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 PLCXD2Q0VAA5 305 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 TRIP13Q15645 432 aaPredicted RBP4.34□□□□□ -1.71
CLIP1-207ENST00000536634 C9orf152Q5JTZ5 239 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 B3GLCTQ6Y288 498 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 PEX26Q7Z412 305 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 GABRG1Q8N1C3 465 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 UBL4BQ8N7F7 174 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 C17orf47Q8NEP4 570 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 PROX1Q92786 737 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 ESAMQ96AP7 390 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 SERPINB12Q96P63 405 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 ZNF300Q96RE9 604 aaPredicted RBP4.34□□□□□ -1.71
CLIP1-207ENST00000536634 HBEGFQ99075 208 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 NKX3-1Q99801 234 aaPredicted RBP4.34□□□□□ -1.71
CLIP1-207ENST00000536634 PELOQ9BRX2 385 aaKnown RBP4.34□□□□□ -1.71
CLIP1-207ENST00000536634 TBCDQ9BTW9 1192 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 ZNF717Q9BY31 904 aaPredicted RBP4.34□□□□□ -1.71
CLIP1-207ENST00000536634 TSGA10Q9BZW7 698 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 ROGDIQ9GZN7 287 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 OR10A4Q9H209 315 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 OR51B5Q9H339 312 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 EHD1Q9H4M9 534 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 NUDT4Q9NZJ9 180 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 ZNF337Q9Y3M9 751 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 ASB4Q9Y574 426 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 SPACA6W5XKT8 324 aa4.34□□□□□ -1.71
CLIP1-207ENST00000536634 HEATR1Q9H583 2144 aaKnown RBP4.34□□□□□ -1.71
CLIP1-207ENST00000536634 DNAH9Q9NYC9 4486 aa4.34□□□□□ -1.72
CLIP1-207ENST00000536634 A0A0A6YYD5 115 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 TRBV5-5A0A0J9YX44 114 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 LRP5LA4QPB2 252 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 EPM2AB3EWF7 344 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 CCL24O00175 119 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 ABCD4O14678 606 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 PGRMC2O15173 223 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 SLC35E2BP0CK96 405 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 SLC35E2P0CK97 266 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 IL11P20809 199 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 PRKACGP22612 351 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 AGTR1P30556 359 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 IL2RGP31785 369 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 HPDP32754 393 aaPredicted RBP4.33□□□□□ -1.72
CLIP1-207ENST00000536634 MAGEA3P43357 314 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 MAGEA6P43360 314 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 TPM4P67936 248 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 CBX1P83916 185 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 CDKL1Q00532 357 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 CDK16Q00536 496 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 BIKQ13323 160 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 EXOSC7Q15024 291 aaKnown RBP4.33□□□□□ -1.72
CLIP1-207ENST00000536634 RAB35Q15286 201 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 TSNQ15631 228 aaKnown RBP4.33□□□□□ -1.72
CLIP1-207ENST00000536634 NPTX1Q15818 432 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 AGAP6Q5VW22 663 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 RAET1LQ5VY80 246 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 OR4C11Q6IEV9 310 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 OR4A47Q6IF82 309 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 CAVIN1Q6NZI2 390 aaKnown RBP4.33□□□□□ -1.72
CLIP1-207ENST00000536634 PAQR6Q6TCH4 344 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 C16orf54Q6UWD8 224 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 CNTN4Q8IWV2 1026 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 ZCCHC7Q8N3Z6 543 aaKnown RBP4.33□□□□□ -1.72
CLIP1-207ENST00000536634 FADS6Q8N9I5 356 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 SNX31Q8N9S9 440 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 STEAP2Q8NFT2 490 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 OR2M3Q8NG83 312 aa4.33□□□□□ -1.72
CLIP1-207ENST00000536634 RNF138Q8WVD3 245 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms