RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 OR4K5Q8NGD3 323 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 OR10A7Q8NGE5 316 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 BRIX1Q8TDN6 353 aaKnown RBP3.38□□□□□ -1.87
MCF2-210ENST00000536274 NUDCD2Q8WVJ2 157 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 FCAMRQ8WWV6 532 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 PIK3IP1Q96FE7 263 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 SMARCD1Q96GM5 515 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 ZC2HC1AQ96GY0 325 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 C4orf36Q96KX1 117 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 GFI1Q99684 422 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 RARRES2Q99969 163 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 PHF7Q9BWX1 381 aaPredicted RBP3.38□□□□□ -1.87
MCF2-210ENST00000536274 ZNF700Q9H0M5 742 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 OR51V1Q9H2C8 321 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 TUBG2Q9NRH3 451 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 TRPC4Q9UBN4 977 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 SUSD2Q9UGT4 822 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 KCNG2Q9UJ96 466 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 CAMK2AQ9UQM7 478 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 WDR45Q9Y484 360 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 CSAG2Q9Y5P2 127 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 PRSS21Q9Y6M0 314 aa3.38□□□□□ -1.87
MCF2-210ENST00000536274 SMIM28A0A1B0GU29 152 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 C1orf226A1L170 272 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 MBLAC1A4D2B0 266 aaPredicted RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 TBC1D3FA6NER0 549 aaPredicted RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 TVP23AA6NH52 213 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 EPOPA6NHQ4 379 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 ZNF724A8MTY0 619 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 NUDT19A8MXV4 375 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 NPIPA7E9PJI5 369 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 MAN2B1O00754 1011 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 TP53I11O14683 189 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 PRODHO43272 600 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 RPP40O75818 363 aaKnown RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 CBR3O75828 277 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 AMBPP02760 352 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 NPIPA8P0DM63 369 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 GTF2F2P13984 249 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 PKMP14618 531 aaKnown RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 TYRP14679 529 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 MC4RP32245 332 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 THBS4P35443 961 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 EFNB2P52799 333 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 YBEYP58557 167 aaPredicted RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 MRPL49Q13405 166 aaKnown RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 IL10RAQ13651 578 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 TMEM69Q5SWH9 247 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 PRAMEF17Q5VTA0 474 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 FAM46CQ5VWP2 391 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 OTPQ5XKR4 325 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 RPL7L1Q6DKI1 246 aaKnown RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 ZNF585AQ6P3V2 769 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 PAQR9Q6ZVX9 377 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 FBXO16Q8IX29 292 aaPredicted RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 BAP18Q8IXM2 172 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 KDM8Q8N371 416 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 ZBTB2Q8N680 514 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 CYB561A3Q8NBI2 242 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 ST6GALNAC3Q8NDV1 305 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 STT3BQ8TCJ2 826 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 SPPL3Q8TCT6 385 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 RNF141Q8WVD5 230 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 FGF11Q92914 225 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 SMARCD2Q92925 531 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 MYADMQ96S97 322 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 CNN2Q99439 309 aaKnown RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 PBDC1Q9BVG4 233 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 ADAM19Q9H013 955 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 ATG5Q9H1Y0 275 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 FZD8Q9H461 694 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 MYOZ1Q9NP98 299 aaPredicted RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 CYTL1Q9NRR1 136 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 SH3BGRL2Q9UJC5 107 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 RNF150Q9ULK6 438 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 HDGFL3Q9Y3E1 203 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 TIMM10BQ9Y5J6 103 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 ALPK2Q86TB3 2170 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 WDFY3Q8IZQ1 3526 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 TSPAN11A1L157 253 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 UNC119BA6NIH7 251 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 A6NIZ1 184 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 H0YIZ8 118 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 EFSO43281 561 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 ZNF208O43345 1280 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 XRCC3O43542 346 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 ADAP1O75689 374 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 DUS4LO95620 317 aaKnown RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 PNPP00491 289 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 LRG1P02750 347 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 H1F0P07305 194 aaKnown RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 DCNP07585 359 aaKnown RBP3.37□□□□□ -1.87
MCF2-210ENST00000536274 CEACAM1P13688 526 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 MMP9P14780 707 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 EPB42P16452 691 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 AMD1P17707 334 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 MPZP25189 248 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 CD82P27701 267 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 TACR3P29371 465 aa3.37□□□□□ -1.87
MCF2-210ENST00000536274 GRPRP30550 384 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms