RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 CDONQ4KMG0 1287 aa20.24■□□□□ 0.83
RBFOX1-206ENST00000535565 PRR30Q53SZ7 412 aaPredicted RBP20.24■□□□□ 0.83
RBFOX1-206ENST00000535565 TSPO2Q5TGU0 170 aa20.24■□□□□ 0.83
RBFOX1-206ENST00000535565 SYS1Q8N2H4 156 aa20.24■□□□□ 0.83
RBFOX1-206ENST00000535565 THEM6Q8WUY1 208 aa20.24■□□□□ 0.83
RBFOX1-206ENST00000535565 C4orf36Q96KX1 117 aa20.24■□□□□ 0.83
RBFOX1-206ENST00000535565 TTYH2Q9BSA4 534 aa20.24■□□□□ 0.83
RBFOX1-206ENST00000535565 TTTY10Q9BZA0 68 aa20.24■□□□□ 0.83
RBFOX1-206ENST00000535565 NELFAQ9H3P2 528 aa20.24■□□□□ 0.83
RBFOX1-206ENST00000535565 POLE4Q9NR33 117 aa20.24■□□□□ 0.83
RBFOX1-206ENST00000535565 UPB1Q9UBR1 384 aa20.24■□□□□ 0.83
RBFOX1-206ENST00000535565 POLR1DQ9Y2S0 133 aa20.24■□□□□ 0.83
RBFOX1-206ENST00000535565 PHF3Q92576 2039 aaKnown RBP20.24■□□□□ 0.83
RBFOX1-206ENST00000535565 TTLL8A6PVC2 850 aa20.23■□□□□ 0.83
RBFOX1-206ENST00000535565 J3QLW9 94 aa20.23■□□□□ 0.83
RBFOX1-206ENST00000535565 SCG5P05408 212 aa20.23■□□□□ 0.83
RBFOX1-206ENST00000535565 DSPP15924 2871 aaKnown RBP20.23■□□□□ 0.83
RBFOX1-206ENST00000535565 ZNF19P17023 458 aa20.23■□□□□ 0.83
RBFOX1-206ENST00000535565 MSR1P21757 451 aa20.23■□□□□ 0.83
RBFOX1-206ENST00000535565 ROR2Q01974 943 aaKnown RBP20.23■□□□□ 0.83
RBFOX1-206ENST00000535565 EIF2B1Q14232 305 aaKnown RBP20.23■□□□□ 0.83
RBFOX1-206ENST00000535565 PCK2Q16822 640 aa20.23■□□□□ 0.83
RBFOX1-206ENST00000535565 C1orf185Q5T7R7 199 aa20.23■□□□□ 0.83
RBFOX1-206ENST00000535565 OTPQ5XKR4 325 aa20.23■□□□□ 0.83
RBFOX1-206ENST00000535565 PLEKHG7Q6ZR37 379 aa20.23■□□□□ 0.83
RBFOX1-206ENST00000535565 FOXL2NBQ6ZUU3 175 aa20.23■□□□□ 0.83
RBFOX1-206ENST00000535565 FAM214BQ7L5A3 538 aa20.23■□□□□ 0.83
RBFOX1-206ENST00000535565 NUFIP2Q7Z417 695 aaKnown RBP20.23■□□□□ 0.83
RBFOX1-206ENST00000535565 C9orf106Q8NAJ2 232 aa20.23■□□□□ 0.83
RBFOX1-206ENST00000535565 ZNF485Q8NCK3 441 aa20.23■□□□□ 0.83
RBFOX1-206ENST00000535565 ISG20L2Q9H9L3 353 aaKnown RBP20.23■□□□□ 0.83
RBFOX1-206ENST00000535565 GPR35Q9HC97 309 aa20.23■□□□□ 0.83
RBFOX1-206ENST00000535565 CCDC160A6NGH7 325 aa20.22■□□□□ 0.83
RBFOX1-206ENST00000535565 ZNF587BE7ETH6 402 aa20.22■□□□□ 0.83
RBFOX1-206ENST00000535565 PRRG2O14669 202 aa20.22■□□□□ 0.83
RBFOX1-206ENST00000535565 NPR2P20594 1047 aa20.22■□□□□ 0.83
RBFOX1-206ENST00000535565 RBPJQ06330 500 aa20.22■□□□□ 0.83
RBFOX1-206ENST00000535565 EGR3Q06889 387 aa20.22■□□□□ 0.83
RBFOX1-206ENST00000535565 ACSM1Q08AH1 577 aa20.22■□□□□ 0.83
RBFOX1-206ENST00000535565 STK11Q15831 433 aa20.22■□□□□ 0.83
RBFOX1-206ENST00000535565 SGCAQ16586 387 aa20.22■□□□□ 0.83
RBFOX1-206ENST00000535565 FAM220AQ7Z4H9 259 aa20.22■□□□□ 0.83
RBFOX1-206ENST00000535565 KCTD20Q7Z5Y7 419 aa20.22■□□□□ 0.83
RBFOX1-206ENST00000535565 EGFL6Q8IUX8 553 aa20.22■□□□□ 0.83
RBFOX1-206ENST00000535565 OPALINQ96PE5 141 aa20.22■□□□□ 0.83
RBFOX1-206ENST00000535565 C12orf49Q9H741 205 aa20.22■□□□□ 0.83
RBFOX1-206ENST00000535565 TRIM36Q9NQ86 728 aa20.22■□□□□ 0.83
RBFOX1-206ENST00000535565 SLC7A10Q9NS82 523 aa20.22■□□□□ 0.83
RBFOX1-206ENST00000535565 BABAM2Q9NXR7 383 aa20.22■□□□□ 0.83
RBFOX1-206ENST00000535565 GNG8Q9UK08 70 aa20.22■□□□□ 0.83
RBFOX1-206ENST00000535565 KLHDC2Q9Y2U9 406 aa20.22■□□□□ 0.83
RBFOX1-206ENST00000535565 TLN1Q9Y490 2541 aaKnown RBP20.22■□□□□ 0.83
RBFOX1-206ENST00000535565 MBD3L4A6NDZ8 208 aaPredicted RBP20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 MBD3L3A6NE82 208 aaPredicted RBP20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 MBD3L5A6NJ08 208 aaPredicted RBP20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 IGHV3-9P01782 118 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 PSKH1P11801 424 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 OR12D2P58182 307 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 LSM6P62312 80 aaKnown RBP20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 MRPS34P82930 218 aaKnown RBP20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 BDH1Q02338 343 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 TSTQ16762 297 aaKnown RBP20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 CEACAM16Q2WEN9 425 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 TP53I3Q53FA7 332 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 GPR107Q5VW38 600 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 KCTD18Q6PI47 426 aaPredicted RBP20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 ABHD12BQ7Z5M8 362 aaPredicted RBP20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 KLBQ86Z14 1044 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 CLVS1Q8IUQ0 354 aaPredicted RBP20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 GCNT2Q8N0V5 402 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 UBE2J2Q8N2K1 259 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 OR2AJ1Q8NGZ0 328 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 MBD3L2Q8NHZ7 208 aaPredicted RBP20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 EMC7Q9NPA0 242 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 BSNQ9UPA5 3926 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 H3BSA7 217 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 CCRL2O00421 344 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 KRT8P05787 483 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 TACSTD2P09758 323 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 EDN3P14138 238 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 LIPAP38571 399 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 RGS6P49758 472 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 PER3P56645 1201 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 TAS2R43P59537 309 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 LY6DQ14210 128 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 VASH1Q7L8A9 365 aaPredicted RBP20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 LINGO2Q7L985 606 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 LINC00346Q8IVM7 164 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 UFD1Q92890 307 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 ZNF837Q96EG3 531 aaPredicted RBP20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 TP63Q9H3D4 680 aaPredicted RBP20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 CYB5R1Q9UHQ9 305 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 IKZF2Q9UKS7 526 aa20.21■□□□□ 0.83
RBFOX1-206ENST00000535565 ZZEF1O43149 2961 aa20.2■□□□□ 0.82
RBFOX1-206ENST00000535565 SPENQ96T58 3664 aaKnown RBP20.2■□□□□ 0.82
RBFOX1-206ENST00000535565 RPL36A-HNRNPH2H7BZ11 118 aa20.2■□□□□ 0.82
RBFOX1-206ENST00000535565 NOL3O60936 208 aaKnown RBP20.2■□□□□ 0.82
RBFOX1-206ENST00000535565 SULT1C4O75897 302 aa20.2■□□□□ 0.82
RBFOX1-206ENST00000535565 CD36P16671 472 aa20.2■□□□□ 0.82
RBFOX1-206ENST00000535565 EDNRAP25101 427 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms