RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, human

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD9-208	ENST00000533643	UGT2A3	Q6UWM9	527 aa		10.44	□□□□□ -0.74
COMMD9-208	ENST00000533643	SKA3	Q8IX90	412 aa		10.44	□□□□□ -0.74
COMMD9-208	ENST00000533643	SLC22A24	Q8N4F4	322 aa		10.44	□□□□□ -0.74
COMMD9-208	ENST00000533643	C1orf162	Q8NEQ5	155 aa	Predicted RBP	10.44	□□□□□ -0.74
COMMD9-208	ENST00000533643	SLC26A10	Q8NG04	563 aa		10.44	□□□□□ -0.74
COMMD9-208	ENST00000533643	CNIH3	Q8TBE1	160 aa		10.44	□□□□□ -0.74
COMMD9-208	ENST00000533643	C11orf40	Q8WZ69	217 aa		10.44	□□□□□ -0.74
COMMD9-208	ENST00000533643		Q96MT0	163 aa		10.44	□□□□□ -0.74
COMMD9-208	ENST00000533643	SH3GL3	Q99963	347 aa		10.44	□□□□□ -0.74
COMMD9-208	ENST00000533643	MARCH7	Q9H992	704 aa		10.44	□□□□□ -0.74
COMMD9-208	ENST00000533643	SIAE	Q9HAT2	523 aa		10.44	□□□□□ -0.74
COMMD9-208	ENST00000533643	EMC7	Q9NPA0	242 aa		10.44	□□□□□ -0.74
COMMD9-208	ENST00000533643	SLC22A31	A6NKX4	558 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	HLA-DQA2	P01906	255 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	HRG	P04196	525 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	OR8G3P	P0DMU2	310 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	NPR2	P20594	1047 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	MSR1	P21757	451 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	IL32	P24001	234 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	BLVRA	P53004	296 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	CDH11	P55287	796 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	ENDOG	Q14249	297 aa	Known RBP	10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	TBRG1	Q3YBR2	411 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	NRN1L	Q496H8	165 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	OR7E24	Q6IFN5	339 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	WDR31	Q8NA23	367 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	STEAP2	Q8NFT2	490 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	SSC4D	Q8WTU2	575 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	RFK	Q969G6	155 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	S100PBP	Q96BU1	408 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	CNBD2	Q96M20	576 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643		Q9H521	79 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	WDR76	Q9H967	626 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	SLC17A5	Q9NRA2	495 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	ZNF224	Q9NZL3	707 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	WARS2	Q9UGM6	360 aa	Known RBP	10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	LRRC42	Q9Y546	428 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	PCDHGB5	Q9Y5G0	923 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	DOPEY1	Q5JWR5	2465 aa		10.43	□□□□□ -0.74
COMMD9-208	ENST00000533643	HELZ2	Q9BYK8	2649 aa	Known RBP	10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	SH3D21	A4FU49	640 aa		10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	OR5H1	A6NKK0	313 aa		10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	FARS2	O95363	451 aa	Known RBP	10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	CST2	P09228	141 aa		10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	PSKH1	P11801	424 aa		10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	HOXB1	P14653	301 aa	Predicted RBP	10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	NUDT6	P53370	316 aa		10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	LSM6	P62312	80 aa	Known RBP	10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	ZNF91	Q05481	1191 aa		10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	TMED1	Q13445	227 aa		10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	GGTLC2	Q14390	218 aa		10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	C6orf141	Q5SZD1	244 aa		10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	LCN1P1	Q5VSP4	162 aa		10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	C22orf34	Q6ZV56	151 aa		10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	TIGD4	Q8IY51	512 aa		10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	LRRC18	Q8N456	261 aa		10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	OR10H5	Q8NGA6	315 aa		10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	FGFBP3	Q8TAT2	258 aa		10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	FBXO17	Q96EF6	278 aa		10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	LRRC46	Q96FV0	321 aa		10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	ZNF416	Q9BWM5	594 aa		10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	ACTR6	Q9GZN1	396 aa		10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	OR10A4	Q9H209	315 aa		10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	AMBN	Q9NP70	447 aa		10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	HAO2	Q9NYQ3	351 aa		10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	UBAP1	Q9NZ09	502 aa		10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	COMMD3-BMI1	R4GMX3	469 aa		10.42	□□□□□ -0.74
COMMD9-208	ENST00000533643	ARPC4-TTLL3	A0A0A6YYG9	625 aa		10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643		A0A1W2PR80	420 aa		10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	ZNF503-AS2	A6NEH8	195 aa		10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	SNTN	A6NMZ2	147 aa		10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	ZNF593	O00488	134 aa	Predicted RBP	10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	SELENOF	O60613	162 aa		10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	HLA-H	P01893	362 aa		10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	MRPL3	P09001	348 aa	Known RBP	10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	PATE4	P0C8F1	98 aa		10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	DBT	P11182	482 aa	Known RBP	10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	ZNF823	P16415	610 aa		10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	NAA10	P41227	235 aa	Predicted RBP	10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	RPS27	P42677	84 aa	Known RBP	10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	MTNR1A	P48039	350 aa		10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	ENTPD1	P49961	510 aa		10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	TUBA1B	P68363	451 aa		10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	TUBA4A	P68366	448 aa		10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	PCK2	Q16822	640 aa		10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	TEX30	Q5JUR7	227 aa		10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	TIMM23B	Q5SRD1	257 aa		10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	TUBA1A	Q71U36	451 aa		10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	SLC16A14	Q7RTX9	510 aa		10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	SLC16A9	Q7RTY1	509 aa		10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	P2RY8	Q86VZ1	359 aa		10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	ERI1	Q8IV48	349 aa	Known RBP	10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	CCDC36	Q8IYA8	594 aa		10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	C17orf78	Q8N4C9	275 aa		10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	SMAP2	Q8WU79	429 aa	Predicted RBP	10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	RNFT2	Q96EX2	444 aa		10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	INTS14	Q96SY0	518 aa		10.41	□□□□□ -0.74
COMMD9-208	ENST00000533643	USB1	Q9BQ65	265 aa	Known RBP	10.41	□□□□□ -0.74

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