RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 MT-ND5P03915 603 aa13.23□□□□□ -0.29
CPSF1-211ENST00000533492 ZNF250P15622 560 aa13.23□□□□□ -0.29
CPSF1-211ENST00000533492 IL2RGP31785 369 aa13.23□□□□□ -0.29
CPSF1-211ENST00000533492 RPL4P36578 427 aaKnown RBP13.23□□□□□ -0.29
CPSF1-211ENST00000533492 GDI2P50395 445 aaKnown RBP13.23□□□□□ -0.29
CPSF1-211ENST00000533492 TMEM33P57088 247 aa13.23□□□□□ -0.29
CPSF1-211ENST00000533492 PSME3P61289 254 aa13.23□□□□□ -0.29
CPSF1-211ENST00000533492 ERVS71-1P61550 626 aa13.23□□□□□ -0.29
CPSF1-211ENST00000533492 ERVK-25P63136 954 aa13.23□□□□□ -0.29
CPSF1-211ENST00000533492 FAM27BQ5VT28 67 aa13.23□□□□□ -0.29
CPSF1-211ENST00000533492 C8orf82Q6P1X6 216 aaPredicted RBP13.23□□□□□ -0.29
CPSF1-211ENST00000533492 TBPL2Q6SJ96 375 aa13.23□□□□□ -0.29
CPSF1-211ENST00000533492 UNQ6126/PRO20091Q6UXV3 157 aa13.23□□□□□ -0.29
CPSF1-211ENST00000533492 MBOAT2Q6ZWT7 520 aa13.23□□□□□ -0.29
CPSF1-211ENST00000533492 NABP1Q96AH0 204 aa13.23□□□□□ -0.29
CPSF1-211ENST00000533492 NDEL1Q9GZM8 345 aa13.23□□□□□ -0.29
CPSF1-211ENST00000533492 HINT3Q9NQE9 182 aaKnown RBP13.23□□□□□ -0.29
CPSF1-211ENST00000533492 GRHPRQ9UBQ7 328 aa13.23□□□□□ -0.29
CPSF1-211ENST00000533492 RPS6KA6Q9UK32 745 aa13.23□□□□□ -0.29
CPSF1-211ENST00000533492 IGLV3-9A0A075B6K5 115 aa13.22□□□□□ -0.29
CPSF1-211ENST00000533492 A0A1W2PPL8 197 aa13.22□□□□□ -0.29
CPSF1-211ENST00000533492 C5orf49A4QMS7 147 aa13.22□□□□□ -0.29
CPSF1-211ENST00000533492 C17orf100A8MU93 164 aa13.22□□□□□ -0.29
CPSF1-211ENST00000533492 PHF1O43189 567 aaPredicted RBP13.22□□□□□ -0.29
CPSF1-211ENST00000533492 NCK1P16333 377 aa13.22□□□□□ -0.29
CPSF1-211ENST00000533492 LAP3P28838 519 aa13.22□□□□□ -0.29
CPSF1-211ENST00000533492 GPR4P46093 362 aa13.22□□□□□ -0.29
CPSF1-211ENST00000533492 PCBD1P61457 104 aa13.22□□□□□ -0.29
CPSF1-211ENST00000533492 MRPS11P82912 194 aaKnown RBP13.22□□□□□ -0.29
CPSF1-211ENST00000533492 PSG4Q00888 419 aa13.22□□□□□ -0.29
CPSF1-211ENST00000533492 CCNIQ14094 377 aa13.22□□□□□ -0.29
CPSF1-211ENST00000533492 CR1LQ2VPA4 569 aa13.22□□□□□ -0.29
CPSF1-211ENST00000533492 ZNF718Q3SXZ3 478 aa13.22□□□□□ -0.29
CPSF1-211ENST00000533492 CLDN22Q8N7P3 220 aa13.22□□□□□ -0.29
CPSF1-211ENST00000533492 LRRC75AQ8NAA5 344 aa13.22□□□□□ -0.29
CPSF1-211ENST00000533492 OR13C2Q8NGS9 318 aa13.22□□□□□ -0.29
CPSF1-211ENST00000533492 AKR7LQ8NHP1 331 aa13.22□□□□□ -0.29
CPSF1-211ENST00000533492 TSPAN32Q96QS1 320 aa13.22□□□□□ -0.29
CPSF1-211ENST00000533492 ZNF416Q9BWM5 594 aa13.22□□□□□ -0.29
CPSF1-211ENST00000533492 FAM107BQ9H098 131 aa13.22□□□□□ -0.29
CPSF1-211ENST00000533492 NMNAT1Q9HAN9 279 aaPredicted RBP13.22□□□□□ -0.29
CPSF1-211ENST00000533492 TIMM10BQ9Y5J6 103 aa13.22□□□□□ -0.29
CPSF1-211ENST00000533492 ENPP4Q9Y6X5 453 aa13.22□□□□□ -0.29
CPSF1-211ENST00000533492 MXRA5Q9NR99 2828 aa13.22□□□□□ -0.29
CPSF1-211ENST00000533492 XKRYO14609 159 aa13.21□□□□□ -0.29
CPSF1-211ENST00000533492 TPD52L2O43399 206 aaKnown RBP13.21□□□□□ -0.29
CPSF1-211ENST00000533492 PPIHO43447 177 aaKnown RBP13.21□□□□□ -0.29
CPSF1-211ENST00000533492 ATP8B1O43520 1251 aa13.21□□□□□ -0.29
CPSF1-211ENST00000533492 CST2P09228 141 aa13.21□□□□□ -0.29
CPSF1-211ENST00000533492 GCH1P30793 250 aa13.21□□□□□ -0.29
CPSF1-211ENST00000533492 MAGEB1P43366 347 aa13.21□□□□□ -0.29
CPSF1-211ENST00000533492 CDH15P55291 814 aa13.21□□□□□ -0.29
CPSF1-211ENST00000533492 CCL8P80075 99 aa13.21□□□□□ -0.29
CPSF1-211ENST00000533492 PCGF3Q3KNV8 242 aa13.21□□□□□ -0.29
CPSF1-211ENST00000533492 ZBED5Q49AG3 693 aa13.21□□□□□ -0.29
CPSF1-211ENST00000533492 GLYATQ6IB77 296 aa13.21□□□□□ -0.29
CPSF1-211ENST00000533492 TMPRSS11FQ6ZWK6 438 aa13.21□□□□□ -0.29
CPSF1-211ENST00000533492 YIPF5Q969M3 257 aa13.21□□□□□ -0.29
CPSF1-211ENST00000533492 POM121L2Q96KW2 1035 aa13.21□□□□□ -0.29
CPSF1-211ENST00000533492 ANKRD19PQ9H560 264 aa13.21□□□□□ -0.29
CPSF1-211ENST00000533492 NARFLQ9H6Q4 476 aa13.21□□□□□ -0.29
CPSF1-211ENST00000533492 ZNF275Q9NSD4 429 aaPredicted RBP13.21□□□□□ -0.29
CPSF1-211ENST00000533492 DECR2Q9NUI1 292 aa13.21□□□□□ -0.29
CPSF1-211ENST00000533492 ADA2Q9NZK5 511 aa13.21□□□□□ -0.29
CPSF1-211ENST00000533492 EGFL7Q9UHF1 273 aa13.21□□□□□ -0.29
CPSF1-211ENST00000533492 TMEFF2Q9UIK5 374 aaPredicted RBP13.21□□□□□ -0.29
CPSF1-211ENST00000533492 TMEM5Q9Y2B1 443 aa13.21□□□□□ -0.29
CPSF1-211ENST00000533492 CDC14BO60729 498 aa13.2□□□□□ -0.3
CPSF1-211ENST00000533492 NCR1O76036 304 aa13.2□□□□□ -0.3
CPSF1-211ENST00000533492 PRSS23O95084 383 aa13.2□□□□□ -0.3
CPSF1-211ENST00000533492 H1F0P07305 194 aaKnown RBP13.2□□□□□ -0.3
CPSF1-211ENST00000533492 CD14P08571 375 aa13.2□□□□□ -0.3
CPSF1-211ENST00000533492 MSR1P21757 451 aa13.2□□□□□ -0.3
CPSF1-211ENST00000533492 THBS2P35442 1172 aa13.2□□□□□ -0.3
CPSF1-211ENST00000533492 TEKQ02763 1124 aa13.2□□□□□ -0.3
CPSF1-211ENST00000533492 GLO1Q04760 184 aa13.2□□□□□ -0.3
CPSF1-211ENST00000533492 FHL1Q13642 323 aa13.2□□□□□ -0.3
CPSF1-211ENST00000533492 C1orf174Q8IYL3 243 aa13.2□□□□□ -0.3
CPSF1-211ENST00000533492 OR2H1Q9GZK4 316 aa13.2□□□□□ -0.3
CPSF1-211ENST00000533492 NSRP1Q9H0G5 558 aaKnown RBP13.2□□□□□ -0.3
CPSF1-211ENST00000533492 MYLK2Q9H1R3 596 aa13.2□□□□□ -0.3
CPSF1-211ENST00000533492 SPAG4Q9NPE6 437 aa13.2□□□□□ -0.3
CPSF1-211ENST00000533492 ABCD2Q9UBJ2 740 aa13.2□□□□□ -0.3
CPSF1-211ENST00000533492 LOC100509620A0A075B734 347 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 PLSCR5A0PG75 271 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 C12orf71A8MTZ7 269 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 B4DSR2 109 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 H7C1C5 153 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 CDC42EP2O14613 210 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 IGHV3-13P01766 116 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 RHCEP18577 417 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 PCMT1P22061 227 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 PRDX6P30041 224 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 SRP14P37108 136 aaKnown RBP13.19□□□□□ -0.3
CPSF1-211ENST00000533492 LCN6P62502 163 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 KRT72Q14CN4 511 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 TSTQ16762 297 aaKnown RBP13.19□□□□□ -0.3
CPSF1-211ENST00000533492 FGD3Q5JSP0 725 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 SPATA46Q5T0L3 261 aa13.19□□□□□ -0.3
CPSF1-211ENST00000533492 ARL9Q6T311 187 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms