RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 OR10A6Q8NH74 314 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 CANT1Q8WVQ1 401 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 WFDC12Q8WWY7 111 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 C11orf40Q8WZ69 217 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 KTI12Q96EK9 354 aaPredicted RBP10.55□□□□□ -0.72
CAPN1-223ENST00000533079 NSMCE2Q96MF7 247 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 DUX5Q96PT3 197 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 MRI1Q9BV20 369 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 RAD21L1Q9H4I0 556 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 TPT1P8Q9HAU6 139 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 C8orf4Q9NR00 106 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 SLC6A13Q9NSD5 602 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 ZNF69Q9UC07 566 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 RIMS3Q9UJD0 308 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 PURGQ9UJV8 347 aaKnown RBP10.55□□□□□ -0.72
CAPN1-223ENST00000533079 AUP1Q9Y679 476 aa10.55□□□□□ -0.72
CAPN1-223ENST00000533079 TRAV36DV7A0A075B6V5 113 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 TIMM23O14925 209 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 KRT75O95678 551 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 KNG1P01042 644 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 PTHP01270 115 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 IGHMP01871 453 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 PRG2P13727 222 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 ACADSP16219 412 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 MDKP21741 143 aaPredicted RBP10.54□□□□□ -0.72
CAPN1-223ENST00000533079 GRPRP30550 384 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 CDKN2CP42773 168 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 FADDQ13158 208 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 RAB39AQ14964 217 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 SLC9A3R2Q15599 337 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 GTDC1Q4AE62 458 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 SWT1Q5T5J6 900 aaKnown RBP10.54□□□□□ -0.72
CAPN1-223ENST00000533079 HIST2H2BDQ6DRA6 164 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 LEG1Q6P5S2 330 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 CYP2R1Q6VVX0 501 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 C17orf107Q6ZR85 190 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 C9orf139Q6ZV77 190 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 DNAJC9Q8WXX5 260 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 TMIGD2Q96BF3 282 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 SLC41A3Q96GZ6 507 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 ZNF184Q99676 751 aaPredicted RBP10.54□□□□□ -0.72
CAPN1-223ENST00000533079 C1QTNF5Q9BXJ0 243 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 IKZF5Q9H5V7 419 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 YY1AP1Q9H869 796 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 THUMPD1Q9NXG2 353 aaKnown RBP10.54□□□□□ -0.72
CAPN1-223ENST00000533079 GMPR2Q9P2T1 348 aaKnown RBP10.54□□□□□ -0.72
CAPN1-223ENST00000533079 CGGBP1Q9UFW8 167 aaPredicted RBP10.54□□□□□ -0.72
CAPN1-223ENST00000533079 EGFL7Q9UHF1 273 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 ZNF232Q9UNY5 417 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 IFT52Q9Y366 437 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 CMYA5Q8N3K9 4069 aa10.54□□□□□ -0.72
CAPN1-223ENST00000533079 ISPDA4D126 451 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 A8MXK9 166 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 CXCR6O00574 342 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 GSTA4O15217 222 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 MFN2O95140 757 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 CLPTM1O96005 669 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 IGHV3-13P01766 116 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 LCKP06239 509 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 BCHEP06276 602 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 FAM157BP0CG42 384 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 PPIAL4GP0DN37 164 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 ZNF81P51508 661 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 ZNF154Q13106 437 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 PMS2P3Q13401 168 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 MAPK11Q15759 364 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 CYP51A1Q16850 503 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 TBC1D28Q2M2D7 210 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 VMACQ2NL98 169 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 KLF17Q5JT82 389 aaPredicted RBP10.53□□□□□ -0.72
CAPN1-223ENST00000533079 CARD17Q5XLA6 110 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 LSMEM1Q8N8F7 131 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 OR1J2Q8NGS2 313 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 OR6N1Q8NGY5 312 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 TAAR8Q969N4 342 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 ZNF48Q96MX3 618 aaPredicted RBP10.53□□□□□ -0.72
CAPN1-223ENST00000533079 TSPAN32Q96QS1 320 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 PKP2Q99959 881 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 MS4A7Q9GZW8 240 aaPredicted RBP10.53□□□□□ -0.72
CAPN1-223ENST00000533079 TMEM38AQ9H6F2 299 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 MAGIXQ9H6Y5 334 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 CDH20Q9HBT6 801 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 DCAF13Q9NV06 445 aaKnown RBP10.53□□□□□ -0.72
CAPN1-223ENST00000533079 RPS6KB2Q9UBS0 482 aa10.53□□□□□ -0.72
CAPN1-223ENST00000533079 NUP214P35658 2090 aaPredicted RBP10.53□□□□□ -0.72
CAPN1-223ENST00000533079 A0A087WUJ7 227 aa10.52□□□□□ -0.73
CAPN1-223ENST00000533079 A0A0G2JPF8 293 aa10.52□□□□□ -0.73
CAPN1-223ENST00000533079 TMEM247A6NEH6 219 aa10.52□□□□□ -0.73
CAPN1-223ENST00000533079 ZNF726A6NNF4 738 aa10.52□□□□□ -0.73
CAPN1-223ENST00000533079 HNRNPCL2B2RXH8 293 aa10.52□□□□□ -0.73
CAPN1-223ENST00000533079 HNRNPCL3B7ZW38 293 aa10.52□□□□□ -0.73
CAPN1-223ENST00000533079 FARS2O95363 451 aaKnown RBP10.52□□□□□ -0.73
CAPN1-223ENST00000533079 HNRNPCL4P0DMR1 293 aa10.52□□□□□ -0.73
CAPN1-223ENST00000533079 OR8G3PP0DMU2 310 aa10.52□□□□□ -0.73
CAPN1-223ENST00000533079 RAP2AP10114 183 aa10.52□□□□□ -0.73
CAPN1-223ENST00000533079 ZNF12P17014 697 aa10.52□□□□□ -0.73
CAPN1-223ENST00000533079 FASP25445 335 aa10.52□□□□□ -0.73
CAPN1-223ENST00000533079 CSNK1A1P48729 337 aa10.52□□□□□ -0.73
CAPN1-223ENST00000533079 MVDP53602 400 aa10.52□□□□□ -0.73
CAPN1-223ENST00000533079 PUDPQ08623 228 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms