RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 EFCAB9A8MZ26 197 aa14.41□□□□□ -0.1
PKP3-209ENST00000533069 OR10H3O60404 316 aa14.41□□□□□ -0.1
PKP3-209ENST00000533069 TRMUO75648 421 aaKnown RBP14.41□□□□□ -0.1
PKP3-209ENST00000533069 IGHMP01871 453 aa14.41□□□□□ -0.1
PKP3-209ENST00000533069 CSF3P09919 207 aa14.41□□□□□ -0.1
PKP3-209ENST00000533069 NPR2P20594 1047 aa14.41□□□□□ -0.1
PKP3-209ENST00000533069 MAKP20794 623 aa14.41□□□□□ -0.1
PKP3-209ENST00000533069 LSM11P83369 360 aaKnown RBP eCLIP14.41□□□□□ -0.1
PKP3-209ENST00000533069 PPP2R2BQ00005 443 aa14.41□□□□□ -0.1
PKP3-209ENST00000533069 SNTB2Q13425 540 aaKnown RBP14.41□□□□□ -0.1
PKP3-209ENST00000533069 LAPTM4AQ15012 233 aa14.41□□□□□ -0.1
PKP3-209ENST00000533069 SLC36A2Q495M3 483 aa14.41□□□□□ -0.1
PKP3-209ENST00000533069 C10orf128Q5T292 105 aa14.41□□□□□ -0.1
PKP3-209ENST00000533069 C1orf94Q6P1W5 598 aa14.41□□□□□ -0.1
PKP3-209ENST00000533069 FAHD1Q6P587 224 aa14.41□□□□□ -0.1
PKP3-209ENST00000533069 PODNL1Q6PEZ8 512 aa14.41□□□□□ -0.1
PKP3-209ENST00000533069 CD300LDQ6UXZ3 194 aa14.41□□□□□ -0.1
PKP3-209ENST00000533069 Q71RC1 249 aaPredicted RBP14.41□□□□□ -0.1
PKP3-209ENST00000533069 OAFQ86UD1 273 aa14.41□□□□□ -0.1
PKP3-209ENST00000533069 CBR4Q8N4T8 237 aa14.41□□□□□ -0.1
PKP3-209ENST00000533069 ATG16L2Q8NAA4 619 aa14.41□□□□□ -0.1
PKP3-209ENST00000533069 FNDC8Q8TC99 324 aa14.41□□□□□ -0.1
PKP3-209ENST00000533069 ZNF75AQ96N20 296 aa14.41□□□□□ -0.1
PKP3-209ENST00000533069 ALG12Q9BV10 488 aa14.41□□□□□ -0.1
PKP3-209ENST00000533069 PLK3Q9H4B4 646 aa14.41□□□□□ -0.1
PKP3-209ENST00000533069 VNN3Q9NY84 501 aa14.41□□□□□ -0.1
PKP3-209ENST00000533069 TRBV4-1A0A0J9YWV2 114 aa14.4□□□□□ -0.1
PKP3-209ENST00000533069 F12P00748 615 aaPredicted RBP14.4□□□□□ -0.1
PKP3-209ENST00000533069 ALPLP05186 524 aa14.4□□□□□ -0.1
PKP3-209ENST00000533069 ZNF26P17031 533 aaPredicted RBP14.4□□□□□ -0.1
PKP3-209ENST00000533069 HOXB4P17483 251 aaPredicted RBP14.4□□□□□ -0.1
PKP3-209ENST00000533069 FUT4P22083 530 aa14.4□□□□□ -0.1
PKP3-209ENST00000533069 NR4A1P22736 598 aa14.4□□□□□ -0.1
PKP3-209ENST00000533069 THBS4P35443 961 aa14.4□□□□□ -0.1
PKP3-209ENST00000533069 PPOXP50336 477 aa14.4□□□□□ -0.1
PKP3-209ENST00000533069 RPL27P61353 136 aaKnown RBP14.4□□□□□ -0.1
PKP3-209ENST00000533069 GALK2Q01415 458 aa14.4□□□□□ -0.1
PKP3-209ENST00000533069 LPCAT4Q643R3 524 aa14.4□□□□□ -0.1
PKP3-209ENST00000533069 ZNF770Q6IQ21 691 aaPredicted RBP14.4□□□□□ -0.1
PKP3-209ENST00000533069 TMEM53Q6P2H8 277 aa14.4□□□□□ -0.1
PKP3-209ENST00000533069 TMPRSS11FQ6ZWK6 438 aa14.4□□□□□ -0.1
PKP3-209ENST00000533069 PARP8Q8N3A8 854 aa14.4□□□□□ -0.1
PKP3-209ENST00000533069 SYT14Q8NB59 555 aa14.4□□□□□ -0.1
PKP3-209ENST00000533069 OR10H5Q8NGA6 315 aa14.4□□□□□ -0.1
PKP3-209ENST00000533069 GNPDA2Q8TDQ7 276 aa14.4□□□□□ -0.1
PKP3-209ENST00000533069 MS4A3Q96HJ5 214 aa14.4□□□□□ -0.1
PKP3-209ENST00000533069 NDEL1Q9GZM8 345 aa14.4□□□□□ -0.1
PKP3-209ENST00000533069 C1orf198Q9H425 327 aa14.4□□□□□ -0.1
PKP3-209ENST00000533069 NSD1Q96L73 2696 aaPredicted RBP14.4□□□□□ -0.1
PKP3-209ENST00000533069 A6NIZ1 184 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 EI24O14681 340 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 SERPINA5P05154 406 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 ZNF35P13682 527 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 SLC25A16P16260 332 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 IGFBP5P24593 272 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 FPR3P25089 353 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 RAP1BP61224 184 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 RPS23P62266 143 aaKnown RBP14.39□□□□□ -0.11
PKP3-209ENST00000533069 RAP1AP62834 184 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 MRPS34P82930 218 aaKnown RBP14.39□□□□□ -0.11
PKP3-209ENST00000533069 MYBPC1Q00872 1141 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 CD47Q08722 323 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 TOP3AQ13472 1001 aaPredicted RBP14.39□□□□□ -0.11
PKP3-209ENST00000533069 KRTAP21-3Q3LHN1 58 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 KDM4DQ6B0I6 523 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 KRT80Q6KB66 452 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 RPL13AP3Q6NVV1 102 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 SLC16A14Q7RTX9 510 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 TMEM179BQ7Z7N9 219 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 ZNF525Q8N782 197 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 OR51A7Q8NH64 312 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 NRG4Q8WWG1 115 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 FAM168AQ92567 244 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 HTRA1Q92743 480 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 HDAC2Q92769 488 aaKnown RBP14.39□□□□□ -0.11
PKP3-209ENST00000533069 NMD3Q96D46 503 aaKnown RBP14.39□□□□□ -0.11
PKP3-209ENST00000533069 KCNK17Q96T54 332 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 FEVQ99581 238 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 SH3GL3Q99963 347 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 KRT84Q9NSB2 600 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 SMPD3Q9NY59 655 aaPredicted RBP14.39□□□□□ -0.11
PKP3-209ENST00000533069 CMAHPQ9Y471 501 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 PLCE1Q9P212 2302 aa14.39□□□□□ -0.11
PKP3-209ENST00000533069 IGHV4-30-2A0A087WSY4 118 aa14.38□□□□□ -0.11
PKP3-209ENST00000533069 TRAV27A0A087WT01 109 aa14.38□□□□□ -0.11
PKP3-209ENST00000533069 SOCS2O14508 198 aa14.38□□□□□ -0.11
PKP3-209ENST00000533069 PTHP01270 115 aa14.38□□□□□ -0.11
PKP3-209ENST00000533069 ERCC1P07992 297 aaPredicted RBP14.38□□□□□ -0.11
PKP3-209ENST00000533069 GLRXP35754 106 aa14.38□□□□□ -0.11
PKP3-209ENST00000533069 RPS6KA3P51812 740 aa14.38□□□□□ -0.11
PKP3-209ENST00000533069 CTXN1P60606 82 aa14.38□□□□□ -0.11
PKP3-209ENST00000533069 TSPAN31Q12999 210 aa14.38□□□□□ -0.11
PKP3-209ENST00000533069 FHL1Q13642 323 aa14.38□□□□□ -0.11
PKP3-209ENST00000533069 RAB39AQ14964 217 aa14.38□□□□□ -0.11
PKP3-209ENST00000533069 LRRC36Q1X8D7 754 aa14.38□□□□□ -0.11
PKP3-209ENST00000533069 THEM4Q5T1C6 240 aa14.38□□□□□ -0.11
PKP3-209ENST00000533069 PGBD2Q6P3X8 592 aa14.38□□□□□ -0.11
PKP3-209ENST00000533069 TBPL2Q6SJ96 375 aa14.38□□□□□ -0.11
PKP3-209ENST00000533069 LRRC75AQ8NAA5 344 aa14.38□□□□□ -0.11
PKP3-209ENST00000533069 AQP11Q8NBQ7 271 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms