RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 VMACQ2NL98 169 aa12.91□□□□□ -0.34
BRPF3-210ENST00000532538 ARMCX4Q5H9R4 360 aa12.91□□□□□ -0.34
BRPF3-210ENST00000532538 FAM209AQ5JX71 171 aa12.91□□□□□ -0.34
BRPF3-210ENST00000532538 HDXQ7Z353 690 aa12.91□□□□□ -0.34
BRPF3-210ENST00000532538 NKAIN4Q8IVV8 208 aa12.91□□□□□ -0.34
BRPF3-210ENST00000532538 MOSPD2Q8NHP6 518 aa12.91□□□□□ -0.34
BRPF3-210ENST00000532538 TMEM239Q8WW34 195 aa12.91□□□□□ -0.34
BRPF3-210ENST00000532538 ECSITQ9BQ95 431 aa12.91□□□□□ -0.34
BRPF3-210ENST00000532538 PRSS27Q9BQR3 290 aa12.91□□□□□ -0.34
BRPF3-210ENST00000532538 MRPL13Q9BYD1 178 aaKnown RBP12.91□□□□□ -0.34
BRPF3-210ENST00000532538 OR2J1Q9GZK6 312 aa12.91□□□□□ -0.34
BRPF3-210ENST00000532538 KAT8Q9H7Z6 458 aaKnown RBP12.91□□□□□ -0.34
BRPF3-210ENST00000532538 MEPEQ9NQ76 525 aaPredicted RBP12.91□□□□□ -0.34
BRPF3-210ENST00000532538 BAG5Q9UL15 447 aa12.91□□□□□ -0.34
BRPF3-210ENST00000532538 MED31Q9Y3C7 131 aa12.91□□□□□ -0.34
BRPF3-210ENST00000532538 DOCK11Q5JSL3 2073 aa12.91□□□□□ -0.34
BRPF3-210ENST00000532538 DEAF1O75398 565 aaPredicted RBP12.9□□□□□ -0.34
BRPF3-210ENST00000532538 FOXH1O75593 365 aa12.9□□□□□ -0.34
BRPF3-210ENST00000532538 IFNA8P32881 189 aa12.9□□□□□ -0.34
BRPF3-210ENST00000532538 LIPAP38571 399 aa12.9□□□□□ -0.34
BRPF3-210ENST00000532538 COMPP49747 757 aaPredicted RBP12.9□□□□□ -0.34
BRPF3-210ENST00000532538 MRPS34P82930 218 aaKnown RBP12.9□□□□□ -0.34
BRPF3-210ENST00000532538 CYLC2Q14093 348 aaPredicted RBP12.9□□□□□ -0.34
BRPF3-210ENST00000532538 LAPTM4AQ15012 233 aa12.9□□□□□ -0.34
BRPF3-210ENST00000532538 HIST3H3Q16695 136 aa12.9□□□□□ -0.34
BRPF3-210ENST00000532538 ZMAT1Q5H9K5 638 aa12.9□□□□□ -0.34
BRPF3-210ENST00000532538 C10orf128Q5T292 105 aa12.9□□□□□ -0.34
BRPF3-210ENST00000532538 ARL9Q6T311 187 aa12.9□□□□□ -0.34
BRPF3-210ENST00000532538 TSPYL5Q86VY4 417 aaPredicted RBP12.9□□□□□ -0.34
BRPF3-210ENST00000532538 ZNF101Q8IZC7 436 aa12.9□□□□□ -0.34
BRPF3-210ENST00000532538 DPP10Q8N608 796 aa12.9□□□□□ -0.34
BRPF3-210ENST00000532538 KLF14Q8TD94 323 aaPredicted RBP12.9□□□□□ -0.34
BRPF3-210ENST00000532538 GEMIN6Q8WXD5 167 aaKnown RBP12.9□□□□□ -0.34
BRPF3-210ENST00000532538 HDAC2Q92769 488 aaKnown RBP12.9□□□□□ -0.34
BRPF3-210ENST00000532538 ELOVL3Q9HB03 270 aa12.9□□□□□ -0.34
BRPF3-210ENST00000532538 NTN4Q9HB63 628 aa12.9□□□□□ -0.34
BRPF3-210ENST00000532538 C20orf141Q9NUB4 165 aa12.9□□□□□ -0.34
BRPF3-210ENST00000532538 INTS9Q9NV88 658 aaKnown RBP12.9□□□□□ -0.34
BRPF3-210ENST00000532538 RIMS3Q9UJD0 308 aa12.9□□□□□ -0.34
BRPF3-210ENST00000532538 WIPF1O43516 503 aa12.89□□□□□ -0.35
BRPF3-210ENST00000532538 IFNA14P01570 189 aa12.89□□□□□ -0.35
BRPF3-210ENST00000532538 H2AFXP16104 143 aaPredicted RBP12.89□□□□□ -0.35
BRPF3-210ENST00000532538 EGR1P18146 543 aa12.89□□□□□ -0.35
BRPF3-210ENST00000532538 TNFSF4P23510 183 aa12.89□□□□□ -0.35
BRPF3-210ENST00000532538 WNT5AP41221 380 aa12.89□□□□□ -0.35
BRPF3-210ENST00000532538 RBM34P42696 430 aaKnown RBP12.89□□□□□ -0.35
BRPF3-210ENST00000532538 OR1E2P47887 323 aa12.89□□□□□ -0.35
BRPF3-210ENST00000532538 PCBD1P61457 104 aa12.89□□□□□ -0.35
BRPF3-210ENST00000532538 TNFAIP6P98066 277 aaPredicted RBP12.89□□□□□ -0.35
BRPF3-210ENST00000532538 PSG4Q00888 419 aa12.89□□□□□ -0.35
BRPF3-210ENST00000532538 PIN1Q13526 163 aaPredicted RBP12.89□□□□□ -0.35
BRPF3-210ENST00000532538 AWAT1Q58HT5 328 aa12.89□□□□□ -0.35
BRPF3-210ENST00000532538 ALG10Q5BKT4 473 aa12.89□□□□□ -0.35
BRPF3-210ENST00000532538 MARS2Q96GW9 593 aaKnown RBP12.89□□□□□ -0.35
BRPF3-210ENST00000532538 TPD52L3Q96J77 140 aa12.89□□□□□ -0.35
BRPF3-210ENST00000532538 POM121L2Q96KW2 1035 aa12.89□□□□□ -0.35
BRPF3-210ENST00000532538 SH3GL1Q99961 368 aa12.89□□□□□ -0.35
BRPF3-210ENST00000532538 ZNF426Q9BUY5 554 aa12.89□□□□□ -0.35
BRPF3-210ENST00000532538 PCDHAC1Q9H158 963 aa12.89□□□□□ -0.35
BRPF3-210ENST00000532538 MSL2Q9HCI7 577 aa12.89□□□□□ -0.35
BRPF3-210ENST00000532538 NPHS2Q9NP85 383 aa12.89□□□□□ -0.35
BRPF3-210ENST00000532538 ZDHHC8Q9ULC8 765 aa12.89□□□□□ -0.35
BRPF3-210ENST00000532538 PCDHGB1Q9Y5G3 927 aa12.89□□□□□ -0.35
BRPF3-210ENST00000532538 LOC100509620A0A075B734 347 aa12.88□□□□□ -0.35
BRPF3-210ENST00000532538 A0A0G2JND7 137 aa12.88□□□□□ -0.35
BRPF3-210ENST00000532538 ZSCAN5BA6NJL1 495 aa12.88□□□□□ -0.35
BRPF3-210ENST00000532538 OR5F1O95221 314 aa12.88□□□□□ -0.35
BRPF3-210ENST00000532538 ABHD16AO95870 558 aa12.88□□□□□ -0.35
BRPF3-210ENST00000532538 IFI30P13284 250 aa12.88□□□□□ -0.35
BRPF3-210ENST00000532538 LAP3P28838 519 aa12.88□□□□□ -0.35
BRPF3-210ENST00000532538 ARFIP2P53365 341 aa12.88□□□□□ -0.35
BRPF3-210ENST00000532538 CTXN1P60606 82 aa12.88□□□□□ -0.35
BRPF3-210ENST00000532538 LRRC23Q53EV4 343 aaPredicted RBP12.88□□□□□ -0.35
BRPF3-210ENST00000532538 ARMC4Q5T2S8 1044 aa12.88□□□□□ -0.35
BRPF3-210ENST00000532538 MBNL2Q5VZF2 373 aaKnown RBP12.88□□□□□ -0.35
BRPF3-210ENST00000532538 RFPL4BQ6ZWI9 263 aa12.88□□□□□ -0.35
BRPF3-210ENST00000532538 ZER1Q7Z7L7 766 aa12.88□□□□□ -0.35
BRPF3-210ENST00000532538 IGFN1Q86VF2 1251 aa12.88□□□□□ -0.35
BRPF3-210ENST00000532538 C1orf174Q8IYL3 243 aa12.88□□□□□ -0.35
BRPF3-210ENST00000532538 MICU2Q8IYU8 434 aa12.88□□□□□ -0.35
BRPF3-210ENST00000532538 KLHL36Q8N4N3 616 aa12.88□□□□□ -0.35
BRPF3-210ENST00000532538 ATP6V1G3Q96LB4 118 aa12.88□□□□□ -0.35
BRPF3-210ENST00000532538 C4orf45Q96LM5 186 aa12.88□□□□□ -0.35
BRPF3-210ENST00000532538 DIRC2Q96SL1 478 aa12.88□□□□□ -0.35
BRPF3-210ENST00000532538 OR2H1Q9GZK4 316 aa12.88□□□□□ -0.35
BRPF3-210ENST00000532538 TXNIPQ9H3M7 391 aa12.88□□□□□ -0.35
BRPF3-210ENST00000532538 SMURF2Q9HAU4 748 aa12.88□□□□□ -0.35
BRPF3-210ENST00000532538 CGGBP1Q9UFW8 167 aaPredicted RBP12.88□□□□□ -0.35
BRPF3-210ENST00000532538 TIMM10BQ9Y5J6 103 aa12.88□□□□□ -0.35
BRPF3-210ENST00000532538 NPTNQ9Y639 398 aa12.88□□□□□ -0.35
BRPF3-210ENST00000532538 IGKV1D-43A0A0B4J1Z2 117 aa12.87□□□□□ -0.35
BRPF3-210ENST00000532538 PIP5K1CO60331 668 aa12.87□□□□□ -0.35
BRPF3-210ENST00000532538 UBOX5O94941 541 aa12.87□□□□□ -0.35
BRPF3-210ENST00000532538 NGFP01138 241 aa12.87□□□□□ -0.35
BRPF3-210ENST00000532538 GSTM3P21266 225 aa12.87□□□□□ -0.35
BRPF3-210ENST00000532538 MMP15P51511 669 aa12.87□□□□□ -0.35
BRPF3-210ENST00000532538 RPL27P61353 136 aaKnown RBP12.87□□□□□ -0.35
BRPF3-210ENST00000532538 UBA52P62987 128 aaKnown RBP12.87□□□□□ -0.35
BRPF3-210ENST00000532538 FOXL1Q12952 345 aa12.87□□□□□ -0.35
BRPF3-210ENST00000532538 MTX3Q5HYI7 312 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms