RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 PCSK6P29122 969 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 PSG4Q00888 419 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 HSF2Q03933 536 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 ENDOGQ14249 297 aaKnown RBP13.34□□□□□ -0.27
CTSB-225ENST00000532409 CARTPTQ16568 116 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 FAM27BQ5VT28 67 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 LCN8Q6JVE9 175 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 FOXL2NBQ6ZUU3 175 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 DPPA2Q7Z7J5 298 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 OR9Q2Q8NGE9 314 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 FANK1Q8TC84 345 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 BCAS4Q8TDM0 211 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 C10orf105Q8TEF2 133 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 FAM168AQ92567 244 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 GPX7Q96SL4 187 aaPredicted RBP13.34□□□□□ -0.27
CTSB-225ENST00000532409 WNT5BQ9H1J7 359 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 SYT4Q9H2B2 425 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 TPK1Q9H3S4 243 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 RERGLQ9H628 205 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 CDH20Q9HBT6 801 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 DYNLRB1Q9NP97 96 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 CCNB1IP1Q9NPC3 277 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 VNN3Q9NY84 501 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 SLC7A8Q9UHI5 535 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 FBXL3Q9UKT7 428 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 SPEF1Q9Y4P9 236 aa13.34□□□□□ -0.27
CTSB-225ENST00000532409 LOC100509620A0A075B734 347 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 IQCMA0A1B0GVH7 501 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 FAM171A2A8MVW0 826 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 XKRYO14609 159 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 MPZL1O95297 269 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 GPANK1O95872 356 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 CLPTM1O96005 669 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 NR2C1P13056 603 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 CCNOP22674 350 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 SDHAP31040 664 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 CDKN2AP42771 156 aaKnown RBP13.33□□□□□ -0.28
CTSB-225ENST00000532409 ALDH3B1P43353 468 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 PPOXP50336 477 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 SMIM11AP58511 58 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 PLP2Q04941 152 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 TRIM25Q14258 630 aaKnown RBP13.33□□□□□ -0.28
CTSB-225ENST00000532409 TBC1D28Q2M2D7 210 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 ALKBH6Q3KRA9 238 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 ZNF774Q6NX45 483 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 PGBD2Q6P3X8 592 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 SMARCD3Q6STE5 483 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 TRPM8Q7Z2W7 1104 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 DHFR2Q86XF0 187 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 ICA1LQ8NDH6 482 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 SAMD8Q96LT4 415 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 TSSK2Q96PF2 358 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 THTPAQ9BU02 230 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 ZNF416Q9BWM5 594 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 OR2H1Q9GZK4 316 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 KCNN2Q9H2S1 579 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 OR52D1Q9H346 318 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 POLE4Q9NR33 117 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 DUSP13Q9UII6 198 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 PRPF19Q9UMS4 504 aaKnown RBP13.33□□□□□ -0.28
CTSB-225ENST00000532409 LYVE1Q9Y5Y7 322 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 FKBP7Q9Y680 259 aa13.33□□□□□ -0.28
CTSB-225ENST00000532409 JMJD1CQ15652 2540 aa13.32□□□□□ -0.28
CTSB-225ENST00000532409 VSTM5A8MXK1 200 aa13.32□□□□□ -0.28
CTSB-225ENST00000532409 INAFM1C9JVW0 142 aa13.32□□□□□ -0.28
CTSB-225ENST00000532409 SLC16A7O60669 478 aa13.32□□□□□ -0.28
CTSB-225ENST00000532409 CST2P09228 141 aa13.32□□□□□ -0.28
CTSB-225ENST00000532409 MSR1P21757 451 aa13.32□□□□□ -0.28
CTSB-225ENST00000532409 FPR3P25089 353 aa13.32□□□□□ -0.28
CTSB-225ENST00000532409 STOMP27105 288 aa13.32□□□□□ -0.28
CTSB-225ENST00000532409 WNT5AP41221 380 aa13.32□□□□□ -0.28
CTSB-225ENST00000532409 MAGEA2P43356 314 aa13.32□□□□□ -0.28
CTSB-225ENST00000532409 GSSP48637 474 aa13.32□□□□□ -0.28
CTSB-225ENST00000532409 DSCR9P59020 149 aa13.32□□□□□ -0.28
CTSB-225ENST00000532409 RFX4Q33E94 735 aa13.32□□□□□ -0.28
CTSB-225ENST00000532409 GPR139Q6DWJ6 353 aa13.32□□□□□ -0.28
CTSB-225ENST00000532409 DPY19L2P2Q6ZN68 376 aa13.32□□□□□ -0.28
CTSB-225ENST00000532409 ZNF101Q8IZC7 436 aa13.32□□□□□ -0.28
CTSB-225ENST00000532409 ARHGAP24Q8N264 748 aa13.32□□□□□ -0.28
CTSB-225ENST00000532409 OR4C15Q8NGM1 316 aa13.32□□□□□ -0.28
CTSB-225ENST00000532409 FNDC8Q8TC99 324 aa13.32□□□□□ -0.28
CTSB-225ENST00000532409 POM121L2Q96KW2 1035 aa13.32□□□□□ -0.28
CTSB-225ENST00000532409 ERMAPQ96PL5 475 aaPredicted RBP13.32□□□□□ -0.28
CTSB-225ENST00000532409 BTBD10Q9BSF8 475 aa13.32□□□□□ -0.28
CTSB-225ENST00000532409 NDEL1Q9GZM8 345 aa13.32□□□□□ -0.28
CTSB-225ENST00000532409 KRCC1Q9NPI7 259 aaPredicted RBP13.32□□□□□ -0.28
CTSB-225ENST00000532409 TMCC3Q9ULS5 477 aa13.32□□□□□ -0.28
CTSB-225ENST00000532409 YLPM1P49750 1951 aaKnown RBP13.31□□□□□ -0.28
CTSB-225ENST00000532409 C5orf49A4QMS7 147 aa13.31□□□□□ -0.28
CTSB-225ENST00000532409 LYNX1G3V0Z9 82 aa13.31□□□□□ -0.28
CTSB-225ENST00000532409 TNFRSF11BO00300 401 aa13.31□□□□□ -0.28
CTSB-225ENST00000532409 DCTN6O00399 190 aa13.31□□□□□ -0.28
CTSB-225ENST00000532409 ACOT8O14734 319 aa13.31□□□□□ -0.28
CTSB-225ENST00000532409 SNAP29O95721 258 aa13.31□□□□□ -0.28
CTSB-225ENST00000532409 LCKP06239 509 aa13.31□□□□□ -0.28
CTSB-225ENST00000532409 LYNX1P0DP58 116 aa13.31□□□□□ -0.28
CTSB-225ENST00000532409 NAT2P11245 290 aa13.31□□□□□ -0.28
CTSB-225ENST00000532409 APLNRP35414 380 aa13.31□□□□□ -0.28
CTSB-225ENST00000532409 MTX3Q5HYI7 312 aa13.31□□□□□ -0.28
CTSB-225ENST00000532409 TMEM255AQ5JRV8 349 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms