RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 RCN3Q96D15 328 aa3.45□□□□□ -1.86
AC055878.1-201ENST00000531858 PGLYRP4Q96LB8 373 aa3.45□□□□□ -1.86
AC055878.1-201ENST00000531858 OR5B12Q96R08 314 aa3.45□□□□□ -1.86
AC055878.1-201ENST00000531858 EPYCQ99645 322 aa3.45□□□□□ -1.86
AC055878.1-201ENST00000531858 FOXC2Q99958 501 aa3.45□□□□□ -1.86
AC055878.1-201ENST00000531858 UTP23Q9BRU9 249 aaKnown RBP3.45□□□□□ -1.86
AC055878.1-201ENST00000531858 RIOK2Q9BVS4 552 aaKnown RBP3.45□□□□□ -1.86
AC055878.1-201ENST00000531858 POTEKPQ9BYX7 375 aa3.45□□□□□ -1.86
AC055878.1-201ENST00000531858 ACTR6Q9GZN1 396 aa3.45□□□□□ -1.86
AC055878.1-201ENST00000531858 OR1A1Q9P1Q5 309 aa3.45□□□□□ -1.86
AC055878.1-201ENST00000531858 HMGXB4Q9UGU5 601 aa3.45□□□□□ -1.86
AC055878.1-201ENST00000531858 SHPKQ9UHJ6 478 aa3.45□□□□□ -1.86
AC055878.1-201ENST00000531858 MUTYHQ9UIF7 546 aa3.45□□□□□ -1.86
AC055878.1-201ENST00000531858 ACOT9Q9Y305 439 aa3.45□□□□□ -1.86
AC055878.1-201ENST00000531858 PLB1Q6P1J6 1458 aa3.45□□□□□ -1.86
AC055878.1-201ENST00000531858 MAPK8IP3Q9UPT6 1336 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 POLR2AP24928 1970 aaKnown RBP3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 GOLGA6L10A6NI86 522 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 A8MX80 341 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 ZNF487B1APH4 448 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 SMKR1H3BMG3 65 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 KLRC4-KLRK1H3BQV0 150 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 MBTPS2O43462 519 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 RAD51CO43502 376 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 CDC40O60508 579 aaKnown RBP eCLIP3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 SEMA4FO95754 770 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 CLDN1O95832 211 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 HPRT1P00492 218 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 ZNF250P15622 560 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 CCKARP32238 428 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 TIMP3P35625 211 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 GPR6P46095 362 aaPredicted RBP3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 TGM4P49221 684 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 PRELPP51888 382 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 BIDP55957 195 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 OR2B8PP59922 312 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 C2orf80Q0P641 193 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 GGTLC2Q14390 218 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 CLINT1Q14677 625 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 MAD2L1BPQ15013 274 aaPredicted RBP3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 PSG5Q15238 335 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 OR7A5Q15622 319 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 RBM48Q5RL73 367 aaKnown RBP3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 CPTPQ5TA50 214 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 RNLSQ5VYX0 342 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 COX15Q7KZN9 410 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 ZNF771Q7L3S4 317 aaPredicted RBP3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 C1QL2Q7Z5L3 287 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 MRPL52Q86TS9 123 aaKnown RBP3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 SETD3Q86TU7 594 aaPredicted RBP3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 OR5AK3PQ8NH89 298 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 FANK1Q8TC84 345 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 NPRL2Q8WTW4 380 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 ING5Q8WYH8 240 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 FGF11Q92914 225 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 B3GALT6Q96L58 329 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 TSNAXQ99598 290 aaKnown RBP3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 MICU1Q9BPX6 476 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 SYT15Q9BQS2 421 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 COPS4Q9BT78 406 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 ZBP1Q9H171 429 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 BEX1Q9HBH7 125 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 C1orf109Q9NX04 203 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 THAP10Q9P2Z0 257 aaPredicted RBP3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 MMP17Q9ULZ9 603 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 SCML1Q9UN30 329 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 ASF1AQ9Y294 204 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 V9GY05 133 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 KIAA1210Q9ULL0 1709 aa3.44□□□□□ -1.86
AC055878.1-201ENST00000531858 IGLV3-22A0A075B6J6 115 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 IGKV1D-8A0A087WSZ0 117 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 TRAV39A0A0B4J263 110 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 IGHV3-16A0A0C4DH30 117 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 A0A1B0GU03 582 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 PSMB11A5LHX3 300 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 ERVV-1B6SEH8 477 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 PRAMEF26H0Y7S4 382 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 hCG_2039718K7EN88 272 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 SGCEO43556 437 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 ICOSLGO75144 302 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 BMP15O95972 392 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 CATP04040 527 aaKnown RBP3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 ARG1P05089 322 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 SERPINA6P08185 405 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 SLC35E2P0CK97 266 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 CALM1P0DP23 149 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 CALM2P0DP24 149 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 CALM3P0DP25 149 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 IGLL1P15814 213 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 IGFBP3P17936 291 aaPredicted RBP3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 CCNE1P24864 410 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 GPX4P36969 197 aaPredicted RBP3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 MAGEA6P43360 314 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 CDC34P49427 236 aaPredicted RBP3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 XKP51811 444 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 SUB1P53999 127 aaKnown RBP eCLIP3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 ERVPABLB-1P60509 514 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 ACTA2P62736 377 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 ACTG2P63267 376 aa3.43□□□□□ -1.86
AC055878.1-201ENST00000531858 ACTC1P68032 377 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms