RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 HRH4Q9H3N8 390 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 FBXO44Q9H4M3 255 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 METTL7AQ9H8H3 244 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 MYOZ2Q9NPC6 264 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 LHX9Q9NQ69 397 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 CUTCQ9NTM9 273 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 ABCB8Q9NUT2 735 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 BABAM1Q9NWV8 329 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 ALKBH4Q9NXW9 302 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 KLHL8Q9P2G9 620 aaPredicted RBP5.02□□□□□ -1.61
CD44-231ENST00000531110 SLC9A2Q9UBY0 812 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 ZNF629Q9UEG4 869 aaPredicted RBP5.02□□□□□ -1.61
CD44-231ENST00000531110 KCNG2Q9UJ96 466 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 ALG6Q9Y672 507 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 CDH10Q9Y6N8 788 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 TTC3P53804 2025 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 TOPAZ1Q8N9V7 1692 aa5.02□□□□□ -1.61
CD44-231ENST00000531110 PTPRJQ12913 1337 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 DIP2BQ9P265 1576 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 FAM240BA0A1B0GVZ2 78 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 hCG_1809904A0A1W2PP81 198 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 A0A1W2PPE2 198 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 A0A1W2PR64 198 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 DHRS12A0PJE2 317 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 GAGE10A6NGK3 116 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 OR52A4PA6NMU1 304 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 AGAP14A8MT82 685 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 PRAMEF26H0Y7S4 382 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 MS4A18H0YCH9 400 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 TRAPPC2LH3BP13 241 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 KLRC4-KLRK1H3BQV0 150 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 GFYI3L273 518 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 ZNF195O14628 629 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 CYB5BO43169 146 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 RNF13O43567 381 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 SPRY3O43610 288 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 PRAMEF11O60813 436 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 ICOSLGO75144 302 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 SLC25A27O95847 323 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 CYB5R3P00387 301 aaPredicted RBP5.01□□□□□ -1.61
CD44-231ENST00000531110 MT-ND1P03886 318 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 SERPINE1P05121 402 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 INHBAP08476 426 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 GIPP09681 153 aaPredicted RBP5.01□□□□□ -1.61
CD44-231ENST00000531110 ETS1P14921 441 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 ZNF14P17017 642 aaPredicted RBP5.01□□□□□ -1.61
CD44-231ENST00000531110 GGT1P19440 569 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 SERPINA2P20848 420 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 BGNP21810 368 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 DRD5P21918 477 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 ZBTB25P24278 435 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 IL12BP29460 328 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 COMPP49747 757 aaPredicted RBP5.01□□□□□ -1.61
CD44-231ENST00000531110 NUDT2P50583 147 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 ATP4BP51164 291 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 CTSCP53634 463 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 CTBP2P56545 445 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 ISL1P61371 349 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 HBA1P69905 142 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 TMEM115Q12893 351 aaPredicted RBP5.01□□□□□ -1.61
CD44-231ENST00000531110 RAB35Q15286 201 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 RBBP7Q16576 425 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 CEACAM21Q3KPI0 293 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 DUSP28Q4G0W2 176 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 EIPR1Q53HC9 387 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 TCTEX1D4Q5JR98 221 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 IDNKQ5T6J7 187 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 PRAMEF5Q5TYX0 476 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 ZNF691Q5VV52 312 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 PRAMEF6Q5VXH4 476 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 RNLSQ5VYX0 342 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 KIAA0930Q6ICG6 404 aaPredicted RBP5.01□□□□□ -1.61
CD44-231ENST00000531110 LINGO4Q6UY18 593 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 CDHR3Q6ZTQ4 885 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 FCRLAQ7L513 359 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 CBWD2Q8IUF1 395 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 SERPINA12Q8IW75 414 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 ZNF100Q8IYN0 542 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 HORMAD2Q8N7B1 307 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 SLC38A9Q8NBW4 561 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 KIAA0895Q8NCT3 520 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 FBXL13Q8NEE6 735 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 OR10W1Q8NGF6 305 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 OR52E4Q8NGH9 312 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 OR11L1Q8NGX0 322 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 HPSE2Q8WWQ2 592 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 CNOT9Q92600 299 aaKnown RBP5.01□□□□□ -1.61
CD44-231ENST00000531110 SMARCD2Q92925 531 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 ADIPOR1Q96A54 375 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 ZNF707Q96C28 371 aaPredicted RBP5.01□□□□□ -1.61
CD44-231ENST00000531110 SLC41A3Q96GZ6 507 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 CELF6Q96J87 481 aaKnown RBP5.01□□□□□ -1.61
CD44-231ENST00000531110 LYZL4Q96KX0 146 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 OR5B12Q96R08 314 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 PCYT2Q99447 389 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 KLHDC3Q9BQ90 382 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 NICN1Q9BSH3 213 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 PHF7Q9BWX1 381 aaPredicted RBP5.01□□□□□ -1.61
CD44-231ENST00000531110 TBL1XR1Q9BZK7 514 aa5.01□□□□□ -1.61
CD44-231ENST00000531110 ULBP1Q9BZM6 244 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms