RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 GOSR2O14653 212 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 EIF3HO15372 352 aaKnown RBP eCLIP3.11□□□□□ -1.91
C11orf88-204ENST00000529661 SOX15O60248 233 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 TSPAN13O95857 204 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 ACTL6AO96019 429 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 ALDOBP05062 364 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 CCL2P13500 99 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 ZNF3P17036 446 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 EIF2S2P20042 333 aaKnown RBP3.11□□□□□ -1.91
C11orf88-204ENST00000529661 DEKP35659 375 aaKnown RBP3.11□□□□□ -1.91
C11orf88-204ENST00000529661 MRPL19P49406 292 aaKnown RBP3.11□□□□□ -1.91
C11orf88-204ENST00000529661 CAV2P51636 162 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 DAZ2Q13117 558 aaKnown RBP3.11□□□□□ -1.91
C11orf88-204ENST00000529661 FZD2Q14332 565 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 CYTH1Q15438 398 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 ZNF630Q2M218 657 aaPredicted RBP3.11□□□□□ -1.91
C11orf88-204ENST00000529661 PAGE3Q5JUK9 113 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 C9orf135Q5VTT2 229 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 STUMQ69YW2 141 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 C22orf42Q6IC83 251 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 ZNF836Q6ZNA1 936 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 Q6ZVH6 145 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 MRPL21Q7Z2W9 205 aaKnown RBP3.11□□□□□ -1.91
C11orf88-204ENST00000529661 HDDC2Q7Z4H3 204 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 FAM9CQ8IZT9 166 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 ZADH2Q8N4Q0 377 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 DCAF4L2Q8NA75 395 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 SUMF2Q8NBJ7 301 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 FBXL13Q8NEE6 735 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 OR1S2Q8NGQ3 325 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 ANGPTL6Q8NI99 470 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 C8orf76Q96K31 380 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 JSRP1Q96MG2 331 aaPredicted RBP3.11□□□□□ -1.91
C11orf88-204ENST00000529661 RARRES2Q99969 163 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 RASL11BQ9BPW5 248 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 TM6SF2Q9BZW4 377 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 OR51M1Q9H341 326 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 SRMSQ9H3Y6 488 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 EML4Q9HC35 981 aaKnown RBP3.11□□□□□ -1.91
C11orf88-204ENST00000529661 DYRK4Q9NR20 520 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 DAZ3Q9NR90 486 aaKnown RBP3.11□□□□□ -1.91
C11orf88-204ENST00000529661 MMP26Q9NRE1 261 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 CCL28Q9NRJ3 127 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 ADAM22Q9P0K1 906 aa3.11□□□□□ -1.91
C11orf88-204ENST00000529661 TRBV9A0A0B4J1U6 114 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 IGKV1D-13A0A0B4J2D9 117 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 SIRPB1O00241 398 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 NDUFAB1O14561 156 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 DYNC1I1O14576 645 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 MRPS12O15235 138 aaKnown RBP3.1□□□□□ -1.91
C11orf88-204ENST00000529661 HUS1O60921 280 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 EIF3GO75821 320 aaKnown RBP eCLIP3.1□□□□□ -1.91
C11orf88-204ENST00000529661 FGFR1OPO95684 399 aaKnown RBP3.1□□□□□ -1.91
C11orf88-204ENST00000529661 FGGP02679 453 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 S100A6P06703 90 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 UBCP0CG48 685 aaKnown RBP3.1□□□□□ -1.91
C11orf88-204ENST00000529661 IGKV1-13P0DP09 117 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 MYL2P10916 166 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 ELK1P19419 428 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 CCNOP22674 350 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 HTR2BP41595 481 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 NSG1P42857 185 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 CCNHP51946 323 aaPredicted RBP3.1□□□□□ -1.91
C11orf88-204ENST00000529661 ACVR1Q04771 509 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 COTL1Q14019 142 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 KIAA0087Q14695 138 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 VAMP3Q15836 100 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 OR52W1Q6IF63 320 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 CNIH2Q6PI25 160 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 CERS6Q6ZMG9 384 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 COPS6Q7L5N1 327 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 SLC16A14Q7RTX9 510 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 THOC6Q86W42 341 aaKnown RBP3.1□□□□□ -1.91
C11orf88-204ENST00000529661 TMEM61Q8N0U2 210 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 HSD17B11Q8NBQ5 300 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 OR51L1Q8NGJ5 315 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 OR10G9Q8NGN4 311 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 OR1N2Q8NGR9 330 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 NAT6Q93015 286 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 MYDGFQ969H8 173 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 ITFG2Q969R8 447 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 LLPHQ9BRT6 129 aaKnown RBP3.1□□□□□ -1.91
C11orf88-204ENST00000529661 NXF3Q9H4D5 531 aaKnown RBP3.1□□□□□ -1.91
C11orf88-204ENST00000529661 TMEM165Q9HC07 324 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 CSNK1G1Q9HCP0 422 aa3.1□□□□□ -1.91
C11orf88-204ENST00000529661 STX18Q9P2W9 335 aaKnown RBP3.1□□□□□ -1.91
C11orf88-204ENST00000529661 V9GYY5 206 aaPredicted RBP3.1□□□□□ -1.91
C11orf88-204ENST00000529661 PHF3Q92576 2039 aaKnown RBP3.1□□□□□ -1.91
C11orf88-204ENST00000529661 GJE1A6NN92 205 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 ZNF726A6NNF4 738 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 ZNF99A8MXY4 864 aaPredicted RBP3.09□□□□□ -1.91
C11orf88-204ENST00000529661 H0Y9J4 135 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 RAB29O14966 203 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 TRAF3IP2O43734 574 aaPredicted RBP3.09□□□□□ -1.91
C11orf88-204ENST00000529661 CBR3O75828 277 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 TNFSF13O75888 250 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 CD82P27701 267 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 LCN1P31025 176 aa3.09□□□□□ -1.91
C11orf88-204ENST00000529661 NAA10P41227 235 aaPredicted RBP3.09□□□□□ -1.91
C11orf88-204ENST00000529661 KCNJ3P48549 501 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms