RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 RCBTB1Q8NDN9 531 aa12.85□□□□□ -0.35
USP48-213ENST00000529637 OR4A4PQ8NGN8 299 aa12.85□□□□□ -0.35
USP48-213ENST00000529637 PDCD10Q9BUL8 212 aa12.85□□□□□ -0.35
USP48-213ENST00000529637 Q9N2J8 555 aa12.85□□□□□ -0.35
USP48-213ENST00000529637 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.85□□□□□ -0.35
USP48-213ENST00000529637 DNAJB12Q9NXW2 375 aaKnown RBP12.85□□□□□ -0.35
USP48-213ENST00000529637 FRRS1LQ9P0K9 344 aa12.85□□□□□ -0.35
USP48-213ENST00000529637 FAM96BQ9Y3D0 163 aa12.85□□□□□ -0.35
USP48-213ENST00000529637 ENTPD2Q9Y5L3 495 aa12.85□□□□□ -0.35
USP48-213ENST00000529637 ARID1AO14497 2285 aa12.85□□□□□ -0.35
USP48-213ENST00000529637 HEATR5AQ86XA9 2040 aa12.85□□□□□ -0.35
USP48-213ENST00000529637 ALOX12BO75342 701 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 NKX2-2O95096 273 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 SEMA4FO95754 770 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 CSF1P09603 554 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 RAB38P57729 211 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 BTG2P78543 158 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 DLX2Q07687 328 aaPredicted RBP12.84□□□□□ -0.35
USP48-213ENST00000529637 HYAL1Q12794 435 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 LIPNQ5VXI9 398 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 OTPQ5XKR4 325 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 STEAP1BQ6NZ63 245 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 ULK3Q6PHR2 472 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 POMZP3Q6PJE2 187 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 ETV3LQ6ZN32 361 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 CCDC36Q8IYA8 594 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 SPAG16Q8N0X2 631 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 ARMC10Q8N2F6 343 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 CLEC1AQ8NC01 280 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 DMBX1Q8NFW5 382 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 ZMAT3Q9HA38 289 aaKnown RBP12.84□□□□□ -0.35
USP48-213ENST00000529637 NIT2Q9NQR4 276 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 GPN3Q9UHW5 284 aaPredicted RBP12.84□□□□□ -0.35
USP48-213ENST00000529637 MPDZO75970 2070 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 TMEM82A0PJX8 343 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 ITGB2P05107 769 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 CD96P40200 585 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 ACAA2P42765 397 aaKnown RBP12.84□□□□□ -0.35
USP48-213ENST00000529637 HAAOP46952 286 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 DIO1P49895 249 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 OR4C3Q8NH37 302 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 DGAT2Q96PD7 388 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 GAREM1Q9H706 876 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 ZFP57Q9NU63 452 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 PLEKHA6Q9Y2H5 1048 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 LOC100509620A0A075B734 347 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 FAM25EA8MYX2 175 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 TNFRSF10CO14798 259 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 CD8AP01732 235 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 CSN2P05814 226 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 MAOAP21397 527 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 RORAP35398 523 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 DHRS2Q13268 280 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 HABP2Q14520 560 aaPredicted RBP12.84□□□□□ -0.35
USP48-213ENST00000529637 UQCC3Q6UW78 93 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 EPHA6Q9UF33 1036 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 SERTAD3Q9UJW9 196 aa12.84□□□□□ -0.35
USP48-213ENST00000529637 MRPS33Q9Y291 106 aaKnown RBP12.84□□□□□ -0.35
USP48-213ENST00000529637 TMEM72A0PK05 275 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 RAB19A4D1S5 217 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 OR14I1A6ND48 311 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 RNH1P13489 461 aaKnown RBP12.83□□□□□ -0.36
USP48-213ENST00000529637 SPI1P17947 270 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 AGTR1P30556 359 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 CASRP41180 1078 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 MNDAP41218 407 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 RBM39Q14498 530 aaKnown RBP12.83□□□□□ -0.36
USP48-213ENST00000529637 Q499Y3 187 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 TMEM205Q6UW68 189 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 ZNF550Q7Z398 422 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 POMGNT2Q8NAT1 580 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 OR5M8Q8NGP6 311 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 C1orf198Q9H425 327 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 FBRSQ9HAH7 460 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 TREM1Q9NP99 234 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 PRTFDC1Q9NRG1 225 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 CYP8B1Q9UNU6 501 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 SULT2B1O00204 365 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 ANKRD16Q6P6B7 361 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 GABRG1Q8N1C3 465 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 NPEPL1Q8NDH3 523 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 MMABQ96EY8 250 aaPredicted RBP12.83□□□□□ -0.36
USP48-213ENST00000529637 MICU1Q9BPX6 476 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 SOHLH2Q9NX45 425 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 OR2AT4A6NND4 320 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 ZNF705EA8MWA4 302 aaPredicted RBP12.83□□□□□ -0.36
USP48-213ENST00000529637 RAD1O60671 282 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 OR2F2O95006 317 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 FARS2O95363 451 aaKnown RBP12.83□□□□□ -0.36
USP48-213ENST00000529637 PMS2P2O95744 297 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 CD1AP06126 327 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 OR2F1Q13607 317 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 GGTLC2Q14390 218 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 ATPAF1Q5TC12 328 aaPredicted RBP12.83□□□□□ -0.36
USP48-213ENST00000529637 SLC35F3Q8IY50 421 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 PHOSPHO1Q8TCT1 267 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 RPS4Y2Q8TD47 263 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 PHYHIPQ92561 330 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 FARSAQ9Y285 508 aaKnown RBP12.83□□□□□ -0.36
USP48-213ENST00000529637 NOP16Q9Y3C1 178 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms