RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 GSTZ1O43708 216 aaPredicted RBP13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 ZIC3O60481 467 aa13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 GPANK1O95872 356 aa13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 ISG15P05161 165 aa13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 H3F3AP84243 136 aa13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 TAB1Q15750 504 aa13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 KCNMB1Q16558 191 aa13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 ACER2Q5QJU3 275 aa13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 TMEM244Q5VVB8 128 aa13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 AGAP6Q5VW22 663 aa13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 PLET1Q6UQ28 207 aa13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 CATSPERDQ86XM0 798 aa13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 UBQLNLQ8IYU4 475 aa13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 PRSS35Q8N3Z0 413 aa13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 RNF133Q8WVZ7 376 aa13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 HSD17B8Q92506 261 aa13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 AGAP4Q96P64 663 aa13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 AMELYQ99218 206 aa13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 C7orf50Q9BRJ6 194 aaKnown RBP13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 HDHD2Q9H0R4 259 aa13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 ABCG5Q9H222 651 aa13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 C1orf198Q9H425 327 aa13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 B3GAT2Q9NPZ5 323 aa13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 P4HTMQ9NXG6 502 aa13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 PCDHGA9Q9Y5G4 932 aaKnown RBP13.19□□□□□ -0.3
ECHDC1-220ENST00000528402 ALPK2Q86TB3 2170 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 A0A0G2JMP0 313 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 A0A0X1KG70 313 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 CENPXA8MT69 81 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 LINC01387J3KSC0 135 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 LYRM1O43325 122 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 TRAF3IP2O43734 574 aaPredicted RBP13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 SLC43A1O75387 559 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 PAHP00439 452 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 FREM3P0C091 2139 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 PGA4P0DJD7 388 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 PGA3P0DJD8 388 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 SNRPBP14678 240 aaKnown RBP13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 KIR3DL2P43630 455 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 MMP16P51512 607 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 MRPS10P82664 201 aaKnown RBP13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 HIST3H3Q16695 136 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 SLC25A47Q6Q0C1 308 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 KLHL24Q6TFL4 600 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 ASB18Q6ZVZ8 466 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 DCXRQ7Z4W1 244 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 LRRTM1Q86UE6 522 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 AKAP14Q86UN6 197 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 ZNF433Q8N7K0 673 aaPredicted RBP13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 OR4M2Q8NGB6 313 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 ST7LQ8TDW4 575 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 S100A16Q96FQ6 103 aaKnown RBP13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 EDEM2Q9BV94 578 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 SF3B5Q9BWJ5 86 aaKnown RBP13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 ABI3Q9P2A4 366 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 CKLFQ9UBR5 152 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 MALT1Q9UDY8 824 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 LRP12Q9Y561 859 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 R4GN57 208 aa13.18□□□□□ -0.3
ECHDC1-220ENST00000528402 A0A1W2PNR3 127 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 OR2M5A3KFT3 312 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 ANXA2P2A6NMY6 339 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 ANXA2P07355 339 aaKnown RBP13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 H2BFMP0C1H6 154 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 CNR1P21554 472 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 ACHEP22303 614 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 SFTPDP35247 375 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 MNDAP41218 407 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 RPS27P42677 84 aaKnown RBP13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 GUCA1AP43080 201 aaPredicted RBP13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 CYB561P49447 251 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 AGFG1P52594 562 aaKnown RBP13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 CAPZA1P52907 286 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 CCDC157Q569K6 752 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 RAET1LQ5VY80 246 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 ZNF57Q68EA5 555 aaPredicted RBP13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 LRRC69Q6ZNQ3 347 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 GPAT4Q86UL3 456 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 OR5H6Q8NGV6 325 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 OR2AJ1Q8NGZ0 328 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 TSEN15Q8WW01 171 aaKnown RBP13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 C11orf40Q8WZ69 217 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 HPS1Q92902 700 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 TMEM106AQ96A25 262 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 PNPLA2Q96AD5 504 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 GNRHR2Q96P88 292 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 RNF121Q9H920 327 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 CYB5R1Q9UHQ9 305 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 HHLA2Q9UM44 414 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 DHDHQ9UQ10 334 aa13.17□□□□□ -0.3
ECHDC1-220ENST00000528402 NCOR1O75376 2440 aa13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 FAM240BA0A1B0GVZ2 78 aa13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 SRSF10O75494 262 aaKnown RBP13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 UBCP0CG48 685 aaKnown RBP13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 PSKH1P11801 424 aa13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 FSTP19883 344 aa13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 DLSTP36957 453 aa13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 CASRP41180 1078 aa13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 SOX2P48431 317 aa13.16□□□□□ -0.3
ECHDC1-220ENST00000528402 ZNF133P52736 654 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms