RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 RGS7BPQ6MZT1 257 aaPredicted RBP28.39■■■□□ 2.14
SSSCA1-205ENST00000527920 ZCCHC24Q8N2G6 241 aaKnown RBP28.39■■■□□ 2.14
SSSCA1-205ENST00000527920 CPEB3Q8NE35 698 aaKnown RBP28.39■■■□□ 2.14
SSSCA1-205ENST00000527920 Q96M85 177 aa28.39■■■□□ 2.14
SSSCA1-205ENST00000527920 SYT3Q9BQG1 590 aa28.39■■■□□ 2.14
SSSCA1-205ENST00000527920 IL1RAPQ9NPH3 570 aa28.39■■■□□ 2.14
SSSCA1-205ENST00000527920 V9GYQ6 96 aa28.39■■■□□ 2.14
SSSCA1-205ENST00000527920 PRSS37A4D1T9 235 aa28.38■■■□□ 2.13
SSSCA1-205ENST00000527920 CRLF1O75462 422 aa28.38■■■□□ 2.13
SSSCA1-205ENST00000527920 CCL2P13500 99 aa28.38■■■□□ 2.13
SSSCA1-205ENST00000527920 MSR1P21757 451 aa28.38■■■□□ 2.13
SSSCA1-205ENST00000527920 GIFP27352 417 aa28.38■■■□□ 2.13
SSSCA1-205ENST00000527920 APEX1P27695 318 aaKnown RBP28.38■■■□□ 2.13
SSSCA1-205ENST00000527920 SDHAP31040 664 aa28.38■■■□□ 2.13
SSSCA1-205ENST00000527920 UCP2P55851 309 aa28.38■■■□□ 2.13
SSSCA1-205ENST00000527920 SYT9Q86SS6 491 aa28.38■■■□□ 2.13
SSSCA1-205ENST00000527920 ARHGAP24Q8N264 748 aa28.38■■■□□ 2.13
SSSCA1-205ENST00000527920 OR52J3Q8NH60 311 aa28.38■■■□□ 2.13
SSSCA1-205ENST00000527920 FOXN4Q96NZ1 517 aa28.38■■■□□ 2.13
SSSCA1-205ENST00000527920 AURKCQ9UQB9 309 aa28.38■■■□□ 2.13
SSSCA1-205ENST00000527920 GADD45GO95257 159 aa28.37■■■□□ 2.13
SSSCA1-205ENST00000527920 ZNF250P15622 560 aa28.37■■■□□ 2.13
SSSCA1-205ENST00000527920 STOMP27105 288 aa28.37■■■□□ 2.13
SSSCA1-205ENST00000527920 LAP3P28838 519 aa28.37■■■□□ 2.13
SSSCA1-205ENST00000527920 SELENOVP59797 346 aa28.37■■■□□ 2.13
SSSCA1-205ENST00000527920 ZNF786Q8N393 782 aa28.37■■■□□ 2.13
SSSCA1-205ENST00000527920 POM121L2Q96KW2 1035 aa28.37■■■□□ 2.13
SSSCA1-205ENST00000527920 OR2H1Q9GZK4 316 aa28.37■■■□□ 2.13
SSSCA1-205ENST00000527920 POLE4Q9NR33 117 aa28.37■■■□□ 2.13
SSSCA1-205ENST00000527920 ADAM21Q9UKJ8 722 aa28.37■■■□□ 2.13
SSSCA1-205ENST00000527920 TIMM10BQ9Y5J6 103 aa28.37■■■□□ 2.13
SSSCA1-205ENST00000527920 IGLV3-9A0A075B6K5 115 aa28.36■■■□□ 2.13
SSSCA1-205ENST00000527920 UNC119BA6NIH7 251 aa28.36■■■□□ 2.13
SSSCA1-205ENST00000527920 STAMBPO95630 424 aa28.36■■■□□ 2.13
SSSCA1-205ENST00000527920 FABP3P05413 133 aa28.36■■■□□ 2.13
SSSCA1-205ENST00000527920 FAM157BP0CG42 384 aa28.36■■■□□ 2.13
SSSCA1-205ENST00000527920 APEHP13798 732 aaKnown RBP28.36■■■□□ 2.13
SSSCA1-205ENST00000527920 PSG4Q00888 419 aa28.36■■■□□ 2.13
SSSCA1-205ENST00000527920 SPIBQ01892 262 aa28.36■■■□□ 2.13
SSSCA1-205ENST00000527920 KRR1Q13601 381 aaKnown RBP28.36■■■□□ 2.13
SSSCA1-205ENST00000527920 CARTPTQ16568 116 aa28.36■■■□□ 2.13
SSSCA1-205ENST00000527920 C6orf52Q5T4I8 152 aa28.36■■■□□ 2.13
SSSCA1-205ENST00000527920 DPY19L2P2Q6ZN68 376 aa28.36■■■□□ 2.13
SSSCA1-205ENST00000527920 ADCK1Q86TW2 530 aa28.36■■■□□ 2.13
SSSCA1-205ENST00000527920 LRP11Q86VZ4 500 aa28.36■■■□□ 2.13
SSSCA1-205ENST00000527920 ACTR3BQ9P1U1 418 aa28.36■■■□□ 2.13
SSSCA1-205ENST00000527920 GPR160Q9UJ42 338 aa28.36■■■□□ 2.13
SSSCA1-205ENST00000527920 A0A1W2PPL8 197 aa28.35■■■□□ 2.13
SSSCA1-205ENST00000527920 H7C1C5 153 aa28.35■■■□□ 2.13
SSSCA1-205ENST00000527920 TXNDC12O95881 172 aa28.35■■■□□ 2.13
SSSCA1-205ENST00000527920 FXYD6P3P58550 94 aa28.35■■■□□ 2.13
SSSCA1-205ENST00000527920 LCN6P62502 163 aa28.35■■■□□ 2.13
SSSCA1-205ENST00000527920 ENDOGQ14249 297 aaKnown RBP28.35■■■□□ 2.13
SSSCA1-205ENST00000527920 MTX3Q5HYI7 312 aa28.35■■■□□ 2.13
SSSCA1-205ENST00000527920 THSD4Q6ZMP0 1018 aa28.35■■■□□ 2.13
SSSCA1-205ENST00000527920 ALDH16A1Q8IZ83 802 aa28.35■■■□□ 2.13
SSSCA1-205ENST00000527920 CCDC197Q8NCU1 140 aa28.35■■■□□ 2.13
SSSCA1-205ENST00000527920 UBASH3BQ8TF42 649 aa28.35■■■□□ 2.13
SSSCA1-205ENST00000527920 C11orf40Q8WZ69 217 aa28.35■■■□□ 2.13
SSSCA1-205ENST00000527920 NSL1Q96IY1 281 aa28.35■■■□□ 2.13
SSSCA1-205ENST00000527920 YAE1D1Q9NRH1 226 aa28.35■■■□□ 2.13
SSSCA1-205ENST00000527920 MYEF2Q9P2K5 600 aaKnown RBP28.35■■■□□ 2.13
SSSCA1-205ENST00000527920 DUSP13Q9UII6 198 aa28.35■■■□□ 2.13
SSSCA1-205ENST00000527920 TEX13CA0A0J9YWL9 993 aa28.34■■■□□ 2.13
SSSCA1-205ENST00000527920 C12orf71A8MTZ7 269 aa28.34■■■□□ 2.13
SSSCA1-205ENST00000527920 A8MV72 311 aaPredicted RBP28.34■■■□□ 2.13
SSSCA1-205ENST00000527920 B2RBV5 119 aa28.34■■■□□ 2.13
SSSCA1-205ENST00000527920 ICMTO60725 284 aa28.34■■■□□ 2.13
SSSCA1-205ENST00000527920 FPR3P25089 353 aa28.34■■■□□ 2.13
SSSCA1-205ENST00000527920 ALDH3B1P43353 468 aa28.34■■■□□ 2.13
SSSCA1-205ENST00000527920 KLF3P57682 345 aaPredicted RBP28.34■■■□□ 2.13
SSSCA1-205ENST00000527920 SMARCD3Q6STE5 483 aa28.34■■■□□ 2.13
SSSCA1-205ENST00000527920 UNQ6126/PRO20091Q6UXV3 157 aa28.34■■■□□ 2.13
SSSCA1-205ENST00000527920 ZER1Q7Z7L7 766 aa28.34■■■□□ 2.13
SSSCA1-205ENST00000527920 C1orf174Q8IYL3 243 aa28.34■■■□□ 2.13
SSSCA1-205ENST00000527920 GPA33Q99795 319 aa28.34■■■□□ 2.13
SSSCA1-205ENST00000527920 BPESC1Q9GZL8 116 aa28.34■■■□□ 2.13
SSSCA1-205ENST00000527920 WNT5BQ9H1J7 359 aa28.34■■■□□ 2.13
SSSCA1-205ENST00000527920 VSX1Q9NZR4 365 aaPredicted RBP28.34■■■□□ 2.13
SSSCA1-205ENST00000527920 FZR1Q9UM11 496 aa28.34■■■□□ 2.13
SSSCA1-205ENST00000527920 A0A1W2PPW3 197 aa28.33■■■□□ 2.13
SSSCA1-205ENST00000527920 LCKP06239 509 aa28.33■■■□□ 2.13
SSSCA1-205ENST00000527920 GDI2P50395 445 aaKnown RBP28.33■■■□□ 2.13
SSSCA1-205ENST00000527920 RPS6KA3P51812 740 aa28.33■■■□□ 2.13
SSSCA1-205ENST00000527920 GGTLC2Q14390 218 aa28.33■■■□□ 2.13
SSSCA1-205ENST00000527920 AKR7LQ8NHP1 331 aa28.33■■■□□ 2.13
SSSCA1-205ENST00000527920 SYNPRQ8TBG9 265 aa28.33■■■□□ 2.13
SSSCA1-205ENST00000527920 RASD2Q96D21 266 aa28.33■■■□□ 2.13
SSSCA1-205ENST00000527920 ZNF416Q9BWM5 594 aa28.33■■■□□ 2.13
SSSCA1-205ENST00000527920 MUC13Q9H3R2 512 aa28.33■■■□□ 2.13
SSSCA1-205ENST00000527920 TPK1Q9H3S4 243 aa28.33■■■□□ 2.13
SSSCA1-205ENST00000527920 SLCO1C1Q9NYB5 712 aa28.33■■■□□ 2.13
SSSCA1-205ENST00000527920 LOC100509620A0A075B734 347 aa28.32■■■□□ 2.12
SSSCA1-205ENST00000527920 IGHV4-31P0DP07 118 aa28.32■■■□□ 2.12
SSSCA1-205ENST00000527920 CTLA4P16410 223 aa28.32■■■□□ 2.12
SSSCA1-205ENST00000527920 CALB2P22676 271 aa28.32■■■□□ 2.12
SSSCA1-205ENST00000527920 IFNGR2P38484 337 aa28.32■■■□□ 2.12
SSSCA1-205ENST00000527920 GZMKP49863 264 aa28.32■■■□□ 2.12
SSSCA1-205ENST00000527920 MAD2L1BPQ15013 274 aaPredicted RBP28.32■■■□□ 2.12
SSSCA1-205ENST00000527920 CYB5R2Q6BCY4 276 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms