RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 TBXA2RP21731 343 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 IFNA8P32881 189 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 GGT2P36268 569 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 DLSTP36957 453 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 SOX3P41225 446 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 NOVA1P51513 510 aaKnown RBP3.74□□□□□ -1.81
CD44-226ENST00000527889 CRISP1P54107 249 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 PNLIPRP2P54317 469 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 RPS15P62841 145 aaKnown RBP3.74□□□□□ -1.81
CD44-226ENST00000527889 IL5RAQ01344 420 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 ZNF117Q03924 483 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 Q0VFX4 171 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 IL24Q13007 206 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 SKP2Q13309 424 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 EIF3IQ13347 325 aaKnown RBP3.74□□□□□ -1.81
CD44-226ENST00000527889 IL13RA2Q14627 380 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 GXYLT1Q4G148 440 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 KLHL26Q53HC5 615 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 FBLN7Q53RD9 439 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 SAPCD1Q5SSQ6 148 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 RIPPLY2Q5TAB7 128 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 EEF1A1P5Q5VTE0 462 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 ZNF691Q5VV52 312 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 CTRB2Q6GPI1 263 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 OR5M10Q6IEU7 315 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 TMEM88Q6PEY1 159 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 TTC33Q6PID6 262 aaPredicted RBP3.74□□□□□ -1.81
CD44-226ENST00000527889 TRAT1Q6PIZ9 186 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 CBLN3Q6UW01 205 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 ZNF813Q6ZN06 617 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 LINC00696Q6ZRV3 163 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 NDUFAF7Q7L592 441 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 RRM2BQ7LG56 351 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 ZNF550Q7Z398 422 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 CCDC71Q8IV32 467 aaPredicted RBP3.74□□□□□ -1.81
CD44-226ENST00000527889 C8orf59Q8N0T1 100 aaPredicted RBP3.74□□□□□ -1.81
CD44-226ENST00000527889 ZNF843Q8N446 348 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 SYT8Q8NBV8 401 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 FAM71CQ8NEG0 241 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 C17orf47Q8NEP4 570 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 OR11G2Q8NGC1 345 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 PFN4Q8NHR9 129 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 NUBPLQ8TB37 319 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 GNPDA2Q8TDQ7 276 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 ST7LQ8TDW4 575 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 ELP5Q8TE02 316 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 HGDQ93099 445 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 ZNF524Q96C55 264 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 DNAJA3Q96EY1 480 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 FAM71F1Q96KD3 344 aaPredicted RBP3.74□□□□□ -1.81
CD44-226ENST00000527889 IMMP1LQ96LU5 166 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 TMEM68Q96MH6 324 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 WDFY2Q96P53 400 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 NODALQ96S42 347 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 PITX2Q99697 317 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 KCNS3Q9BQ31 491 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 PSD2Q9BQI7 771 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 PRSS27Q9BQR3 290 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 ZNF559Q9BR84 538 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 RHNO1Q9BSD3 238 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 DGCR6LQ9BY27 220 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 GABARAPL3Q9BY60 117 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 MRPL37Q9BZE1 423 aaKnown RBP3.74□□□□□ -1.81
CD44-226ENST00000527889 GPR61Q9BZJ8 451 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 TBL1XR1Q9BZK7 514 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 PLA2G12AQ9BZM1 189 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 HDHD2Q9H0R4 259 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 POLR2J3Q9H1A7 115 aaKnown RBP3.74□□□□□ -1.81
CD44-226ENST00000527889 EGLN3Q9H6Z9 239 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 ZNF696Q9H7X3 374 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 POLR1BQ9H9Y6 1135 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 ZNF556Q9HAH1 456 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 TMEM27Q9HBJ8 222 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 ZNF160Q9HCG1 818 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 BATF3Q9NR55 127 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 UBQLN4Q9NRR5 601 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 C20orf141Q9NUB4 165 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 PEMTQ9UBM1 199 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 MGAT4CQ9UBM8 478 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 RPS6KB2Q9UBS0 482 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 IL17BQ9UHF5 180 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 FBXL4Q9UKA2 621 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 MRTO4Q9UKD2 239 aaKnown RBP3.74□□□□□ -1.81
CD44-226ENST00000527889 PPIEQ9UNP9 301 aaKnown RBP3.74□□□□□ -1.81
CD44-226ENST00000527889 MGAT4BQ9UQ53 548 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 RNF6Q9Y252 685 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 FARSAQ9Y285 508 aaKnown RBP3.74□□□□□ -1.81
CD44-226ENST00000527889 SLC35A3Q9Y2D2 325 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 MYRFQ9Y2G1 1151 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 NOX1Q9Y5S8 564 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 DOCK11Q5JSL3 2073 aa3.74□□□□□ -1.81
CD44-226ENST00000527889 TRAV27A0A087WT01 109 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 NSG1A0A0A6YYJ2 146 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 GAGE12BA1L429 117 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 GAGE12HA6NDE8 117 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 TMEM210A6NLX4 147 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 B4DXG7 233 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 G3V3Y1 287 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 H3BN98 237 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 AP4M1O00189 453 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms