RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 C17orf67Q0P5P2 114 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 ZP4Q12836 540 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 KCTD18Q6PI47 426 aaPredicted RBP15.76■□□□□ 0.11
USH1C-205ENST00000527020 NDUFAF7Q7L592 441 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 OR52N5Q8NH56 324 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 NUBPLQ8TB37 319 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 C15orf40Q8WUR7 153 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 RNF138Q8WVD3 245 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 ASB5Q8WWX0 329 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 THRSPQ92748 146 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 NOX3Q9HBY0 568 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 NPDC1Q9NQX5 325 aaPredicted RBP15.76■□□□□ 0.11
USH1C-205ENST00000527020 PTTG3PQ9NZH4 202 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 PCDHGA5Q9Y5G8 931 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 LY6G6EA0A0G2JKS1 128 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 CIB4A0PJX0 185 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 ALOX12BO75342 701 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 IFNGR1P15260 489 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 CRABP1P29762 137 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 RAD52P43351 418 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 RIDAP52758 137 aaKnown RBP15.76■□□□□ 0.11
USH1C-205ENST00000527020 GLO1Q04760 184 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 OR7A5Q15622 319 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 GUSBP11Q6P575 273 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 LUZP2Q86TE4 346 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 SLC26A10Q8NG04 563 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 MFSD8Q8NHS3 518 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 PMEPA1Q969W9 287 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 OR6C1Q96RD1 312 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 UTP23Q9BRU9 249 aaKnown RBP15.76■□□□□ 0.11
USH1C-205ENST00000527020 U3KQA8 63 aa15.76■□□□□ 0.11
USH1C-205ENST00000527020 PHF3Q92576 2039 aaKnown RBP15.76■□□□□ 0.11
USH1C-205ENST00000527020 IGKV1D-43A0A0B4J1Z2 117 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 GGT3PA6NGU5 568 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 TTLL8A6PVC2 850 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 H7C417 338 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 SLC17A2O00624 439 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 KDM4BO94953 1096 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 C2orf76Q3KRA6 126 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 PTCRAQ6ISU1 281 aaPredicted RBP15.75■□□□□ 0.11
USH1C-205ENST00000527020 NLRC3Q7RTR2 1065 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 ZNF454Q8N9F8 522 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 SEC22CQ9BRL7 303 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 ZNF436Q9C0F3 470 aaPredicted RBP15.75■□□□□ 0.11
USH1C-205ENST00000527020 HEXA-AS1Q9H8Q6 139 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 MTFP1Q9UDX5 166 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 VDAC3Q9Y277 283 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 TRBV11-1A0A0K0K1C0 115 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 A0A1W2PQM1 296 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 SHISA8B8ZZ34 492 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 ICMTO60725 284 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 TSC22D2O75157 780 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 FOSL2P15408 326 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 IGFBP3P17936 291 aaPredicted RBP15.75■□□□□ 0.11
USH1C-205ENST00000527020 CXCL12P48061 93 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 FOXF1Q12946 379 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 RAB11BQ15907 218 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 METTL11BQ5VVY1 283 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 TMEM225Q6GV28 225 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 PAPD4Q6PIY7 484 aaKnown RBP15.75■□□□□ 0.11
USH1C-205ENST00000527020 GLDNQ6ZMI3 551 aaPredicted RBP15.75■□□□□ 0.11
USH1C-205ENST00000527020 H1FNTQ75WM6 255 aaPredicted RBP15.75■□□□□ 0.11
USH1C-205ENST00000527020 PLPP7Q8NBV4 271 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 ST7LQ8TDW4 575 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 SLC25A28Q96A46 364 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 FAM3DQ96BQ1 224 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 KCNK17Q96T54 332 aa15.75■□□□□ 0.11
USH1C-205ENST00000527020 ARPC4-TTLL3A0A0A6YYG9 625 aa15.74■□□□□ 0.11
USH1C-205ENST00000527020 EFNA2O43921 213 aa15.74■□□□□ 0.11
USH1C-205ENST00000527020 NDUFB6O95139 128 aa15.74■□□□□ 0.11
USH1C-205ENST00000527020 DCNP07585 359 aaKnown RBP15.74■□□□□ 0.11
USH1C-205ENST00000527020 APOBEC1P41238 236 aaKnown RBP15.74■□□□□ 0.11
USH1C-205ENST00000527020 ARRB1P49407 418 aaPredicted RBP15.74■□□□□ 0.11
USH1C-205ENST00000527020 MECP2P51608 486 aaKnown RBP15.74■□□□□ 0.11
USH1C-205ENST00000527020 SUMO3P55854 103 aaPredicted RBP15.74■□□□□ 0.11
USH1C-205ENST00000527020 PER3P56645 1201 aa15.74■□□□□ 0.11
USH1C-205ENST00000527020 GNG2P59768 71 aa15.74■□□□□ 0.11
USH1C-205ENST00000527020 ACY1Q03154 408 aa15.74■□□□□ 0.11
USH1C-205ENST00000527020 CSRP2Q16527 193 aa15.74■□□□□ 0.11
USH1C-205ENST00000527020 PCK2Q16822 640 aa15.74■□□□□ 0.11
USH1C-205ENST00000527020 LGALSLQ3ZCW2 172 aaPredicted RBP15.74■□□□□ 0.11
USH1C-205ENST00000527020 SLC25A25Q6KCM7 469 aa15.74■□□□□ 0.11
USH1C-205ENST00000527020 BPHLQ86WA6 291 aaPredicted RBP15.74■□□□□ 0.11
USH1C-205ENST00000527020 OR1J4Q8NGS1 313 aa15.74■□□□□ 0.11
USH1C-205ENST00000527020 SCP2D1Q9UJQ7 156 aa15.74■□□□□ 0.11
USH1C-205ENST00000527020 ELF5Q9UKW6 265 aaPredicted RBP15.74■□□□□ 0.11
USH1C-205ENST00000527020 DHDHQ9UQ10 334 aa15.74■□□□□ 0.11
USH1C-205ENST00000527020 TMEM272A0A1B0GTI8 110 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 A0A1W2PPC1 479 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 CPED1A4D0V7 1026 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 A6NIZ1 184 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 DOK2O60496 412 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 CD37P11049 281 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 ANXA7P20073 488 aaKnown RBP15.73■□□□□ 0.11
USH1C-205ENST00000527020 RAP1BP61224 184 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 RAP1AP62834 184 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 GUCA2AQ02747 115 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 SQSTM1Q13501 440 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 ZBTB37Q5TC79 503 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 ZNF385CQ66K41 422 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms