RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 TINAGQ9UJW2 476 aa12.68□□□□□ -0.38
COLCA2-202ENST00000526216 ARHGAP21Q5T5U3 1957 aa12.68□□□□□ -0.38
COLCA2-202ENST00000526216 DOCK7Q96N67 2140 aa12.68□□□□□ -0.38
COLCA2-202ENST00000526216 SHANK1Q9Y566 2161 aa12.68□□□□□ -0.38
COLCA2-202ENST00000526216 DAPL1A0PJW8 107 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 RPL36A-HNRNPH2H7BZ11 118 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 ZNF593O00488 134 aaPredicted RBP12.67□□□□□ -0.38
COLCA2-202ENST00000526216 SEC14L2O76054 403 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 LALBAP00709 142 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 HRGP04196 525 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 SPARCP09486 303 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 GLI4P10075 376 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 NR2C1P13056 603 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 ALOX5APP20292 161 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 CEACAM8P31997 349 aaPredicted RBP12.67□□□□□ -0.38
COLCA2-202ENST00000526216 RPL5P46777 297 aaKnown RBP12.67□□□□□ -0.38
COLCA2-202ENST00000526216 NR1H2P55055 460 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 ACTC1P68032 377 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 ACTA1P68133 377 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 ADAM8P78325 824 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 ROR2Q01974 943 aaKnown RBP12.67□□□□□ -0.38
COLCA2-202ENST00000526216 NFATC3Q12968 1075 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 ENDOGQ14249 297 aaKnown RBP12.67□□□□□ -0.38
COLCA2-202ENST00000526216 GALEQ14376 348 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 RAB39AQ14964 217 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 TEX30Q5JUR7 227 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 ZNF684Q5T5D7 378 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 LINC00346Q8IVM7 164 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 OTOSQ8NHW6 89 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 TM9SF2Q99805 663 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 ALG8Q9BVK2 526 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 TP63Q9H3D4 680 aaPredicted RBP12.67□□□□□ -0.38
COLCA2-202ENST00000526216 SEC61A2Q9H9S3 476 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 INPP5EQ9NRR6 644 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 LHFPL6Q9Y693 200 aa12.67□□□□□ -0.38
COLCA2-202ENST00000526216 DPPA5A6NC42 116 aa12.66□□□□□ -0.38
COLCA2-202ENST00000526216 ZNF99A8MXY4 864 aaPredicted RBP12.66□□□□□ -0.38
COLCA2-202ENST00000526216 PRRG2O14669 202 aa12.66□□□□□ -0.38
COLCA2-202ENST00000526216 CGAP01215 116 aa12.66□□□□□ -0.38
COLCA2-202ENST00000526216 MYL12AP19105 171 aa12.66□□□□□ -0.38
COLCA2-202ENST00000526216 MRPS34P82930 218 aaKnown RBP12.66□□□□□ -0.38
COLCA2-202ENST00000526216 SF3B4Q15427 424 aaKnown RBP eCLIP12.66□□□□□ -0.389e-13■■■■■ 71.1
COLCA2-202ENST00000526216 CDONQ4KMG0 1287 aa12.66□□□□□ -0.38
COLCA2-202ENST00000526216 SYT6Q5T7P8 510 aaPredicted RBP12.66□□□□□ -0.38
COLCA2-202ENST00000526216 OR2A2Q6IF42 318 aa12.66□□□□□ -0.38
COLCA2-202ENST00000526216 CORO6Q6QEF8 472 aa12.66□□□□□ -0.38
COLCA2-202ENST00000526216 ZNF322Q6U7Q0 402 aaPredicted RBP12.66□□□□□ -0.38
COLCA2-202ENST00000526216 ZNF367Q7RTV3 350 aa12.66□□□□□ -0.38
COLCA2-202ENST00000526216 BTLAQ7Z6A9 289 aa12.66□□□□□ -0.38
COLCA2-202ENST00000526216 SATL1Q86VE3 508 aa12.66□□□□□ -0.38
COLCA2-202ENST00000526216 ZNF100Q8IYN0 542 aa12.66□□□□□ -0.38
COLCA2-202ENST00000526216 ST6GALNAC3Q8NDV1 305 aa12.66□□□□□ -0.38
COLCA2-202ENST00000526216 OR6K3Q8NGY3 331 aa12.66□□□□□ -0.38
COLCA2-202ENST00000526216 OR52N1Q8NH53 320 aa12.66□□□□□ -0.38
COLCA2-202ENST00000526216 ST7LQ8TDW4 575 aa12.66□□□□□ -0.38
COLCA2-202ENST00000526216 SPRYD4Q8WW59 207 aaPredicted RBP12.66□□□□□ -0.38
COLCA2-202ENST00000526216 OPALINQ96PE5 141 aa12.66□□□□□ -0.38
COLCA2-202ENST00000526216 TTYH2Q9BSA4 534 aa12.66□□□□□ -0.38
COLCA2-202ENST00000526216 MND1Q9BWT6 205 aa12.66□□□□□ -0.38
COLCA2-202ENST00000526216 B3GAT2Q9NPZ5 323 aa12.66□□□□□ -0.38
COLCA2-202ENST00000526216 TMEM38BQ9NVV0 291 aa12.66□□□□□ -0.38
COLCA2-202ENST00000526216 GTF3C1Q12789 2109 aa12.66□□□□□ -0.38
COLCA2-202ENST00000526216 ZNF670-ZNF695F2Z2N8 137 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 MYL12BO14950 172 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 ABHD16AO95870 558 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 ITGA5P08648 1049 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 HOXD4P09016 255 aaPredicted RBP12.65□□□□□ -0.38
COLCA2-202ENST00000526216 TMIGD3P0DMS9 266 aaPredicted RBP12.65□□□□□ -0.38
COLCA2-202ENST00000526216 B4GALT1P15291 398 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 TIMP3P35625 211 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 TGFBR2P37173 567 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 ZNF84P51523 738 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 WNT4P56705 351 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 OR12D2P58182 307 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 ARF1P84077 181 aaKnown RBP12.65□□□□□ -0.38
COLCA2-202ENST00000526216 FAPQ12884 760 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 STK11Q15831 433 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 SGCAQ16586 387 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 TP53I3Q53FA7 332 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 C9orf135Q5VTT2 229 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 SLC18B1Q6NT16 456 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 KLHL36Q8N4N3 616 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 CNEP1R1Q8N9A8 125 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 OR10H5Q8NGA6 315 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 OR10S1Q8NGN2 331 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 OR13F1Q8NGS4 319 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 GATAD2BQ8WXI9 593 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 STARD4Q96DR4 205 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 MAP6Q96JE9 813 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 FOXB1Q99853 325 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 ABHD6Q9BV23 337 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 ZNF416Q9BWM5 594 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 NELFAQ9H3P2 528 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 MALT1Q9UDY8 824 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 CYB5R1Q9UHQ9 305 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 MRM2Q9UI43 246 aaKnown RBP12.65□□□□□ -0.38
COLCA2-202ENST00000526216 SH3BGRL2Q9UJC5 107 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 ERGIC3Q9Y282 383 aa12.65□□□□□ -0.38
COLCA2-202ENST00000526216 CAB39Q9Y376 341 aaPredicted RBP12.65□□□□□ -0.38
COLCA2-202ENST00000526216 EMC9Q9Y3B6 208 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms