RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 EGLN3Q9H6Z9 239 aa8.83□□□□□ -1
VPS28-204ENST00000526054 RNPEPL1Q9HAU8 725 aa8.83□□□□□ -1
VPS28-204ENST00000526054 NTN4Q9HB63 628 aa8.83□□□□□ -1
VPS28-204ENST00000526054 YAE1D1Q9NRH1 226 aa8.83□□□□□ -1
VPS28-204ENST00000526054 TBC1D23Q9NUY8 699 aa8.83□□□□□ -1
VPS28-204ENST00000526054 IL20Q9NYY1 176 aa8.83□□□□□ -1
VPS28-204ENST00000526054 POU2F3Q9UKI9 436 aa8.83□□□□□ -1
VPS28-204ENST00000526054 IER3IP1Q9Y5U9 82 aa8.83□□□□□ -1
VPS28-204ENST00000526054 SLC25A15Q9Y619 301 aa8.83□□□□□ -1
VPS28-204ENST00000526054 HEATR1Q9H583 2144 aaKnown RBP8.83□□□□□ -1
VPS28-204ENST00000526054 A0A1W2PR80 420 aa8.82□□□□□ -1
VPS28-204ENST00000526054 PRSS37A4D1T9 235 aa8.82□□□□□ -1
VPS28-204ENST00000526054 H3BN98 237 aa8.82□□□□□ -1
VPS28-204ENST00000526054 H7C1C5 153 aa8.82□□□□□ -1
VPS28-204ENST00000526054 IDH3BO43837 385 aa8.82□□□□□ -1
VPS28-204ENST00000526054 SEC14L2O76054 403 aa8.82□□□□□ -1
VPS28-204ENST00000526054 SOX14O95416 240 aa8.82□□□□□ -1
VPS28-204ENST00000526054 TXNDC12O95881 172 aa8.82□□□□□ -1
VPS28-204ENST00000526054 ZNF23P17027 643 aa8.82□□□□□ -1
VPS28-204ENST00000526054 CAPZA2P47755 286 aa8.82□□□□□ -1
VPS28-204ENST00000526054 ZNF83P51522 516 aa8.82□□□□□ -1
VPS28-204ENST00000526054 ZNF133P52736 654 aaPredicted RBP8.82□□□□□ -1
VPS28-204ENST00000526054 LCN6P62502 163 aa8.82□□□□□ -1
VPS28-204ENST00000526054 FMODQ06828 376 aa8.82□□□□□ -1
VPS28-204ENST00000526054 SPOCK1Q08629 439 aa8.82□□□□□ -1
VPS28-204ENST00000526054 NRN1LQ496H8 165 aa8.82□□□□□ -1
VPS28-204ENST00000526054 MESTQ5EB52 335 aa8.82□□□□□ -1
VPS28-204ENST00000526054 CLEC12AQ5QGZ9 265 aa8.82□□□□□ -1
VPS28-204ENST00000526054 LRFN4Q6PJG9 635 aa8.82□□□□□ -1
VPS28-204ENST00000526054 DNM1P34Q6PK57 102 aa8.82□□□□□ -1
VPS28-204ENST00000526054 SLC22A25Q6T423 547 aa8.82□□□□□ -1
VPS28-204ENST00000526054 ZNF627Q7L945 461 aa8.82□□□□□ -1
VPS28-204ENST00000526054 ZDHHC13Q8IUH4 622 aa8.82□□□□□ -1
VPS28-204ENST00000526054 HS3ST5Q8IZT8 346 aa8.82□□□□□ -1
VPS28-204ENST00000526054 SVOPLQ8N434 492 aa8.82□□□□□ -1
VPS28-204ENST00000526054 WDR31Q8NA23 367 aa8.82□□□□□ -1
VPS28-204ENST00000526054 LRTOMTQ8WZ04 291 aa8.82□□□□□ -1
VPS28-204ENST00000526054 ZNF837Q96EG3 531 aaPredicted RBP8.82□□□□□ -1
VPS28-204ENST00000526054 CENPNQ96H22 339 aaPredicted RBP8.82□□□□□ -1
VPS28-204ENST00000526054 SNX18Q96RF0 628 aa8.82□□□□□ -1
VPS28-204ENST00000526054 NIPSNAP1Q9BPW8 284 aa8.82□□□□□ -1
VPS28-204ENST00000526054 RHNO1Q9BSD3 238 aa8.82□□□□□ -1
VPS28-204ENST00000526054 TSSK6Q9BXA6 273 aa8.82□□□□□ -1
VPS28-204ENST00000526054 CACNG6Q9BXT2 260 aa8.82□□□□□ -1
VPS28-204ENST00000526054 NELFAQ9H3P2 528 aa8.82□□□□□ -1
VPS28-204ENST00000526054 TMEM38BQ9NVV0 291 aa8.82□□□□□ -1
VPS28-204ENST00000526054 BAIAP2Q9UQB8 552 aa8.82□□□□□ -1
VPS28-204ENST00000526054 IGHV4-30-2A0A087WSY4 118 aa8.81□□□□□ -1
VPS28-204ENST00000526054 SLC22A23A1A5C7 686 aa8.81□□□□□ -1
VPS28-204ENST00000526054 RNF212BA8MTL3 300 aa8.81□□□□□ -1
VPS28-204ENST00000526054 G3V2T6 193 aa8.81□□□□□ -1
VPS28-204ENST00000526054 H3BNX3 289 aa8.81□□□□□ -1
VPS28-204ENST00000526054 M0R1B8 84 aa8.81□□□□□ -1
VPS28-204ENST00000526054 UBL3O95164 117 aa8.81□□□□□ -1
VPS28-204ENST00000526054 SLC2A10O95528 541 aa8.81□□□□□ -1
VPS28-204ENST00000526054 RENP00797 406 aa8.81□□□□□ -1
VPS28-204ENST00000526054 IFNA2P01563 188 aa8.81□□□□□ -1
VPS28-204ENST00000526054 OR8G3PP0DMU2 310 aa8.81□□□□□ -1
VPS28-204ENST00000526054 ANPEPP15144 967 aa8.81□□□□□ -1
VPS28-204ENST00000526054 NPR2P20594 1047 aa8.81□□□□□ -1
VPS28-204ENST00000526054 PTAFRP25105 342 aa8.81□□□□□ -1
VPS28-204ENST00000526054 GUCA1AP43080 201 aaPredicted RBP8.81□□□□□ -1
VPS28-204ENST00000526054 MRPS34P82930 218 aaKnown RBP8.81□□□□□ -1
VPS28-204ENST00000526054 SNCBQ16143 134 aa8.81□□□□□ -1
VPS28-204ENST00000526054 SLC36A3Q495N2 470 aa8.81□□□□□ -1
VPS28-204ENST00000526054 SLC25A47Q6Q0C1 308 aa8.81□□□□□ -1
VPS28-204ENST00000526054 CLEC2AQ6UVW9 174 aa8.81□□□□□ -1
VPS28-204ENST00000526054 DPPA2Q7Z7J5 298 aa8.81□□□□□ -1
VPS28-204ENST00000526054 AMIGO2Q86SJ2 522 aa8.81□□□□□ -1
VPS28-204ENST00000526054 SLC22A24Q8N4F4 322 aa8.81□□□□□ -1
VPS28-204ENST00000526054 OR2T33Q8NG76 320 aa8.81□□□□□ -1
VPS28-204ENST00000526054 OR8D4Q8NGM9 314 aa8.81□□□□□ -1
VPS28-204ENST00000526054 OR4K13Q8NH42 304 aa8.81□□□□□ -1
VPS28-204ENST00000526054 NSMAFQ92636 917 aa8.81□□□□□ -1
VPS28-204ENST00000526054 NMD3Q96D46 503 aaKnown RBP8.81□□□□□ -1
VPS28-204ENST00000526054 DHRS9Q9BPW9 319 aa8.81□□□□□ -1
VPS28-204ENST00000526054 PLA2G12AQ9BZM1 189 aa8.81□□□□□ -1
VPS28-204ENST00000526054 GABARAPL1Q9H0R8 117 aa8.81□□□□□ -1
VPS28-204ENST00000526054 SYT4Q9H2B2 425 aa8.81□□□□□ -1
VPS28-204ENST00000526054 SEMA6AQ9H2E6 1030 aa8.81□□□□□ -1
VPS28-204ENST00000526054 PAPOLBQ9NRJ5 636 aaKnown RBP8.81□□□□□ -1
VPS28-204ENST00000526054 CBLN4Q9NTU7 201 aa8.81□□□□□ -1
VPS28-204ENST00000526054 VSX1Q9NZR4 365 aaPredicted RBP8.81□□□□□ -1
VPS28-204ENST00000526054 PLCE1Q9P212 2302 aa8.81□□□□□ -1
VPS28-204ENST00000526054 A0A1W2PPL8 197 aa8.8□□□□□ -1
VPS28-204ENST00000526054 A8MV72 311 aaPredicted RBP8.8□□□□□ -1
VPS28-204ENST00000526054 E7EQL1 145 aa8.8□□□□□ -1
VPS28-204ENST00000526054 BHLHE40O14503 412 aa8.8□□□□□ -1
VPS28-204ENST00000526054 KHDRBS3O75525 346 aaKnown RBP8.8□□□□□ -1
VPS28-204ENST00000526054 RAB36O95755 333 aa8.8□□□□□ -1
VPS28-204ENST00000526054 BAG2O95816 211 aa8.8□□□□□ -1
VPS28-204ENST00000526054 IFNGP01579 166 aa8.8□□□□□ -1
VPS28-204ENST00000526054 OSMP13725 252 aa8.8□□□□□ -1
VPS28-204ENST00000526054 HIST1H1CP16403 213 aaKnown RBP8.8□□□□□ -1
VPS28-204ENST00000526054 PRKACGP22612 351 aa8.8□□□□□ -1
VPS28-204ENST00000526054 CD40P25942 277 aa8.8□□□□□ -1
VPS28-204ENST00000526054 POU1F1P28069 291 aa8.8□□□□□ -1
VPS28-204ENST00000526054 CRABP1P29762 137 aa8.8□□□□□ -1
VPS28-204ENST00000526054 TTKP33981 857 aa8.8□□□□□ -1
VPS28-204ENST00000526054 ARR3P36575 388 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms