RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 ZMYND11Q15326 602 aa2□□□□□ -2.09
COPB1-203ENST00000525214 SMUG1Q53HV7 270 aa2□□□□□ -2.09
COPB1-203ENST00000525214 CCDC73Q6ZRK6 1079 aa2□□□□□ -2.09
COPB1-203ENST00000525214 CTAGE6Q86UF2 777 aa2□□□□□ -2.09
COPB1-203ENST00000525214 LRRC52Q8N7C0 313 aa2□□□□□ -2.09
COPB1-203ENST00000525214 CEP112Q8N8E3 955 aa2□□□□□ -2.09
COPB1-203ENST00000525214 OR8U1Q8NH10 309 aa2□□□□□ -2.09
COPB1-203ENST00000525214 CIRBP-AS1Q8TBR5 109 aa2□□□□□ -2.09
COPB1-203ENST00000525214 FAM110BQ8TC76 370 aa2□□□□□ -2.09
COPB1-203ENST00000525214 C17orf50Q8WW18 174 aa2□□□□□ -2.09
COPB1-203ENST00000525214 CREB3L1Q96BA8 519 aa2□□□□□ -2.09
COPB1-203ENST00000525214 CAMK2N2Q96S95 79 aa2□□□□□ -2.09
COPB1-203ENST00000525214 ZNF607Q96SK3 696 aa2□□□□□ -2.09
COPB1-203ENST00000525214 SH3GL3Q99963 347 aa2□□□□□ -2.09
COPB1-203ENST00000525214 SLC39A3Q9BRY0 314 aa2□□□□□ -2.09
COPB1-203ENST00000525214 PKIBQ9C010 78 aa2□□□□□ -2.09
COPB1-203ENST00000525214 VCX2Q9H322 139 aa2□□□□□ -2.09
COPB1-203ENST00000525214 SAV1Q9H4B6 383 aaPredicted RBP2□□□□□ -2.09
COPB1-203ENST00000525214 RABL2AQ9UBK7 228 aaPredicted RBP2□□□□□ -2.09
COPB1-203ENST00000525214 CAB39Q9Y376 341 aaPredicted RBP2□□□□□ -2.09
COPB1-203ENST00000525214 MMACHCQ9Y4U1 282 aa2□□□□□ -2.09
COPB1-203ENST00000525214 ADGRL1O94910 1474 aa2□□□□□ -2.09
COPB1-203ENST00000525214 CDHR2Q9BYE9 1310 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 A0A0B4J2A0 478 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 FAM240BA0A1B0GVZ2 78 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 XKRY2A2RUG3 117 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 CASQ2O14958 399 aaPredicted RBP1.99□□□□□ -2.09
COPB1-203ENST00000525214 YIF1AO95070 293 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 IQCF3P0C7M6 154 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 DBTP11182 482 aaKnown RBP1.99□□□□□ -2.09
COPB1-203ENST00000525214 SSR1P43307 286 aaKnown RBP1.99□□□□□ -2.09
COPB1-203ENST00000525214 CXCL12P48061 93 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 CEBPDP49716 269 aaPredicted RBP1.99□□□□□ -2.09
COPB1-203ENST00000525214 RORCP51449 518 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 OGDHQ02218 1023 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 ZNF92Q03936 586 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 IL15RAQ13261 267 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 MAB21L1Q13394 359 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 PON2Q15165 354 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 OR4F3Q6IEY1 312 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 PMF1Q6P1K2 205 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 ZFP1Q6P2D0 407 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 ZYG11AQ6WRX3 759 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 PEX26Q7Z412 305 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 HDDC2Q7Z4H3 204 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 NANOGNBQ7Z5D8 188 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 CDH26Q8IXH8 852 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 BHLHE23Q8NDY6 225 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 OR2T3Q8NH03 318 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 COQ8AQ8NI60 647 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 COL21A1Q96P44 957 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 CCDC77Q9BR77 488 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 SLC25A2Q9BXI2 301 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 GCOM2Q9BZD3 368 aaPredicted RBP1.99□□□□□ -2.09
COPB1-203ENST00000525214 SHPKQ9UHJ6 478 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 ZNF230Q9UIE0 474 aaPredicted RBP1.99□□□□□ -2.09
COPB1-203ENST00000525214 ATP10AO60312 1499 aa1.99□□□□□ -2.09
COPB1-203ENST00000525214 FAM47DPA6NHR8 397 aa1.98□□□□□ -2.09
COPB1-203ENST00000525214 ARPC3O15145 178 aa1.98□□□□□ -2.09
COPB1-203ENST00000525214 FCMRO60667 390 aa1.98□□□□□ -2.09
COPB1-203ENST00000525214 SURF6O75683 361 aaKnown RBP1.98□□□□□ -2.09
COPB1-203ENST00000525214 CIB2O75838 187 aa1.98□□□□□ -2.09
COPB1-203ENST00000525214 CD74P04233 296 aa1.98□□□□□ -2.09
COPB1-203ENST00000525214 ZNF806P0C7X5 589 aa1.98□□□□□ -2.09
COPB1-203ENST00000525214 AQP2P41181 271 aa1.98□□□□□ -2.09
COPB1-203ENST00000525214 AIF1P55008 147 aa1.98□□□□□ -2.09
COPB1-203ENST00000525214 CCNA1P78396 465 aa1.98□□□□□ -2.09
COPB1-203ENST00000525214 BEX3Q00994 111 aa1.98□□□□□ -2.09
COPB1-203ENST00000525214 PIGHQ14442 188 aaPredicted RBP1.98□□□□□ -2.09
COPB1-203ENST00000525214 IMMTQ16891 758 aaKnown RBP1.98□□□□□ -2.09
COPB1-203ENST00000525214 EXOC3L2Q2M3D2 409 aa1.98□□□□□ -2.09
COPB1-203ENST00000525214 KCTD21Q4G0X4 260 aa1.98□□□□□ -2.09
COPB1-203ENST00000525214 METAP1DQ6UB28 335 aaPredicted RBP1.98□□□□□ -2.09
COPB1-203ENST00000525214 RUFY3Q7L099 469 aa1.98□□□□□ -2.09
COPB1-203ENST00000525214 EFL1Q7Z2Z2 1120 aaKnown RBP1.98□□□□□ -2.09
COPB1-203ENST00000525214 OR4K5Q8NGD3 323 aa1.98□□□□□ -2.09
COPB1-203ENST00000525214 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.98□□□□□ -2.09
COPB1-203ENST00000525214 SLC41A3Q96GZ6 507 aa1.98□□□□□ -2.09
COPB1-203ENST00000525214 PSKH2Q96QS6 385 aa1.98□□□□□ -2.09
COPB1-203ENST00000525214 PARP12Q9H0J9 701 aaKnown RBP1.98□□□□□ -2.09
COPB1-203ENST00000525214 RPF2Q9H7B2 306 aaKnown RBP1.98□□□□□ -2.09
COPB1-203ENST00000525214 TMED5Q9Y3A6 229 aa1.98□□□□□ -2.09
COPB1-203ENST00000525214 BPY2O14599 106 aa1.97□□□□□ -2.09
COPB1-203ENST00000525214 KLHL41O60662 606 aa1.97□□□□□ -2.09
COPB1-203ENST00000525214 SNNO75324 88 aaPredicted RBP1.97□□□□□ -2.09
COPB1-203ENST00000525214 WBP4O75554 376 aaKnown RBP1.97□□□□□ -2.09
COPB1-203ENST00000525214 SCGNO76038 276 aa1.97□□□□□ -2.09
COPB1-203ENST00000525214 OR7A10O76100 309 aa1.97□□□□□ -2.09
COPB1-203ENST00000525214 HLA-DQA1P01909 254 aa1.97□□□□□ -2.09
COPB1-203ENST00000525214 SERPINB5P36952 375 aa1.97□□□□□ -2.09
COPB1-203ENST00000525214 CDKN1BP46527 198 aa1.97□□□□□ -2.09
COPB1-203ENST00000525214 ZNF138P52744 262 aa1.97□□□□□ -2.09
COPB1-203ENST00000525214 ACTR3P61158 418 aa1.97□□□□□ -2.09
COPB1-203ENST00000525214 UBE2HP62256 183 aa1.97□□□□□ -2.09
COPB1-203ENST00000525214 RPL23AP62750 156 aaKnown RBP1.97□□□□□ -2.09
COPB1-203ENST00000525214 CUL2Q13617 745 aa1.97□□□□□ -2.09
COPB1-203ENST00000525214 RGNQ15493 299 aa1.97□□□□□ -2.09
COPB1-203ENST00000525214 SSX2Q16385 188 aa1.97□□□□□ -2.09
COPB1-203ENST00000525214 TEX43Q6ZNM6 134 aa1.97□□□□□ -2.09
COPB1-203ENST00000525214 LHFPL3Q86UP9 236 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms