RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 RAB1BQ9H0U4 201 aa11.05□□□□□ -0.64
TRAPPC4-205ENST00000525079 EMC7Q9NPA0 242 aa11.05□□□□□ -0.64
TRAPPC4-205ENST00000525079 KRCC1Q9NPI7 259 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC4-205ENST00000525079 FAM53CQ9NYF3 392 aa11.05□□□□□ -0.64
TRAPPC4-205ENST00000525079 IER3IP1Q9Y5U9 82 aa11.05□□□□□ -0.64
TRAPPC4-205ENST00000525079 NIPBLQ6KC79 2804 aaeCLIP11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 PRSS37A4D1T9 235 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 OR10H3O60404 316 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 PPP1R3DO95685 299 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 CLPTM1O96005 669 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 TP53P04637 393 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 LCKP06239 509 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 SLC25A16P16260 332 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 CALB2P22676 271 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 STOMP27105 288 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 RPS23P62266 143 aaKnown RBP11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 PPP2R2BQ00005 443 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 MS4A2Q01362 244 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 KRR1Q13601 381 aaKnown RBP11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 SPATS1Q496A3 300 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 RGS7BPQ6MZT1 257 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 SMARCD3Q6STE5 483 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 FNDC8Q8TC99 324 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 CLPTM1LQ96KA5 538 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 ZNF416Q9BWM5 594 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 WNT5BQ9H1J7 359 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 LRMDAQ9H2I8 198 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 C1orf198Q9H425 327 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 IL1RAPQ9NPH3 570 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 NRIP3Q9NQ35 241 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 YAE1D1Q9NRH1 226 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 ACTR3BQ9P1U1 418 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 REV1Q9UBZ9 1251 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 TMCC3Q9ULS5 477 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 ZANQ9Y493 2812 aa11.04□□□□□ -0.64
TRAPPC4-205ENST00000525079 LOC100509620A0A075B734 347 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 A0A1W2PPW3 197 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 TCRBV5S2A0A599 114 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 C5orf49A4QMS7 147 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 LYNX1G3V0Z9 82 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 M0R233 179 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 SYNGR3O43761 229 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 SLC16A7O60669 478 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 MPZL1O95297 269 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 ERCC1P07992 297 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 CST2P09228 141 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 CSF3P09919 207 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 LYNX1P0DP58 116 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 DAOP14920 347 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 CTLA4P16410 223 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 SDHAP31040 664 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 CDKN2AP42771 156 aaKnown RBP11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 GDI2P50395 445 aaKnown RBP11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 UCP2P55851 309 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 LOXL1Q08397 574 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 DBPQ10586 325 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 PPP1R8Q12972 351 aaKnown RBP11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 ENDOGQ14249 297 aaKnown RBP11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 GGTLC2Q14390 218 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 GPR139Q6DWJ6 353 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 ZNF774Q6NX45 483 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 DPY19L2P2Q6ZN68 376 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 FOXL2NBQ6ZUU3 175 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 PTCHD4Q6ZW05 846 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 OR1J1Q8NGS3 322 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 NEU4Q8WWR8 484 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 POM121L2Q96KW2 1035 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 SAMD8Q96LT4 415 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 ERMAPQ96PL5 475 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 PIMREGQ9BSJ6 248 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 OR2H1Q9GZK4 316 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 SYT4Q9H2B2 425 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 POLE4Q9NR33 117 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 FBXO9Q9UK97 447 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 COA3Q9Y2R0 106 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 TIMM10BQ9Y5J6 103 aa11.03□□□□□ -0.64
TRAPPC4-205ENST00000525079 LOC390937A0A1W2PQ73 354 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 C12orf71A8MTZ7 269 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 VWC2LB2RUY7 222 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 CD5LO43866 347 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 KHDRBS3O75525 346 aaKnown RBP11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 STAMBPO95630 424 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 SNAP29O95721 258 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 GPANK1O95872 356 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 NAT2P11245 290 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 MSR1P21757 451 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 USF1P22415 310 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 WNT5AP41221 380 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 RAD52P43351 418 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 NR4A2P43354 598 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 CENPAP49450 140 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 EVX1P49640 407 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 RPS6KA3P51812 740 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 GLO1Q04760 184 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 TRIM25Q14258 630 aaKnown RBP11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 TMEM249Q2WGJ8 235 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 RFX4Q33E94 735 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 SPATA46Q5T0L3 261 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 DHFR2Q86XF0 187 aa11.02□□□□□ -0.65
TRAPPC4-205ENST00000525079 ARHGAP24Q8N264 748 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms