RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 RNF144BQ7Z419 303 aa4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 RNF130Q86XS8 419 aa4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 KLBQ86Z14 1044 aa4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 RIMKLAQ8IXN7 391 aa4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 CDK20Q8IZL9 346 aa4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 CADM2Q8N3J6 435 aa4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 C3orf56Q8N813 242 aa4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 ANKFN1Q8N957 763 aa4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 ZIC4Q8N9L1 334 aa4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 POMGNT2Q8NAT1 580 aa4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 FAM71CQ8NEG0 241 aa4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 PNPT1Q8TCS8 783 aaKnown RBP4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 CKAP2Q8WWK9 683 aa4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 TMEM45BQ96B21 275 aa4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 SLC25A36Q96CQ1 311 aa4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 RNFT2Q96EX2 444 aa4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 KATNB1Q9BVA0 655 aa4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 TAPBPLQ9BX59 468 aa4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 TXLNGYQ9BZA5 131 aa4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 DPY30Q9C005 99 aa4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 CTDSP1Q9GZU7 261 aa4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 PLK3Q9H4B4 646 aa4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 SLC17A7Q9P2U7 560 aa4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 MARCOQ9UEW3 520 aaPredicted RBP4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 ZDHHC2Q9UIJ5 367 aa4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 V9GYY5 206 aaPredicted RBP4.51□□□□□ -1.69
CTNNA1-239ENST00000523685 DPPA5A6NC42 116 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 TMEM247A6NEH6 219 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 LIPT2A6NK58 231 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 HMGN4O00479 90 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 ZNF208O43345 1280 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 KCNAB3O43448 404 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 UPK3AO75631 287 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 SEC14L2O76054 403 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 CHRM4P08173 479 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 TACSTD2P09758 323 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 NR2F1P10589 423 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 UQCRBP14927 111 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 IL7RP16871 459 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 NCF2P19878 526 aaPredicted RBP4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 PCMT1P22061 227 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 GIFP27352 417 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 ARRB2P32121 409 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 CDH15P55291 814 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 NME5P56597 212 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 CLDN8P56748 225 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 CLDN17P56750 224 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 COPZ1P61923 177 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 ARF1P84077 181 aaKnown RBP4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 ROR2Q01974 943 aaKnown RBP4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 EMX2Q04743 252 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 SRSF4Q08170 494 aaKnown RBP4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 MAD2L1Q13257 205 aaPredicted RBP4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 SNTB2Q13425 540 aaKnown RBP4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 GNA13Q14344 377 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 EFNB3Q15768 340 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 SYPL1Q16563 259 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 ZSWIM7Q19AV6 140 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 MRPL2Q5T653 305 aaKnown RBP4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 ANXA8L1Q5VT79 327 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 PRAMEF8Q5VWM4 474 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 PRAMEF7Q5VXH5 474 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 SAXO2Q658L1 398 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 FAHD2BQ6P2I3 314 aaPredicted RBP4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 LINGO2Q7L985 606 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 MYPOPQ86VE0 399 aaPredicted RBP4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 GLCCI1Q86VQ1 547 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 KDM8Q8N371 416 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 ZNF786Q8N393 782 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 OR4F15Q8NGB8 312 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 MIPOL1Q8TD10 442 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 BCL2L2Q92843 193 aaPredicted RBP4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 FAHD2AQ96GK7 314 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 APOPT1Q96IL0 206 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 ANKRD27Q96NW4 1050 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 SIGLEC11Q96RL6 698 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 MYCBPQ99417 103 aaPredicted RBP4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 DOK1Q99704 481 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 SLC35A5Q9BS91 424 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 SF3B5Q9BWJ5 86 aaKnown RBP4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 CADM1Q9BY67 442 aaKnown RBP4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 CRLF2Q9HC73 371 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 EXOSC3Q9NQT5 275 aaKnown RBP4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 POLE3Q9NRF9 147 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 HIF1ANQ9NWT6 349 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 TREM2Q9NZC2 230 aa4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 YLPM1P49750 1951 aaKnown RBP4.5□□□□□ -1.69
CTNNA1-239ENST00000523685 HEATR1Q9H583 2144 aaKnown RBP4.49□□□□□ -1.69
CTNNA1-239ENST00000523685 ARFGEF3Q5TH69 2177 aa4.49□□□□□ -1.69
CTNNA1-239ENST00000523685 ARPC4-TTLL3A0A0A6YYG9 625 aa4.49□□□□□ -1.69
CTNNA1-239ENST00000523685 IGHV2OR16-5A0A0B4J2B6 119 aa4.49□□□□□ -1.69
CTNNA1-239ENST00000523685 PRSS51A0A1B0GVH4 220 aa4.49□□□□□ -1.69
CTNNA1-239ENST00000523685 TMEM129A0AVI4 362 aa4.49□□□□□ -1.69
CTNNA1-239ENST00000523685 WDR91A4D1P6 747 aa4.49□□□□□ -1.69
CTNNA1-239ENST00000523685 CXorf65A6NEN9 183 aa4.49□□□□□ -1.69
CTNNA1-239ENST00000523685 ERICH4A6NGS2 130 aa4.49□□□□□ -1.69
CTNNA1-239ENST00000523685 SH2D7A6NKC9 451 aaPredicted RBP4.49□□□□□ -1.69
CTNNA1-239ENST00000523685 B4DSR2 109 aa4.49□□□□□ -1.69
CTNNA1-239ENST00000523685 FAM157AC9JC47 383 aa4.49□□□□□ -1.69
CTNNA1-239ENST00000523685 WNT9BO14905 357 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms