RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, human

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-215	ENST00000522963		Q9H521	79 aa		10.46	□□□□□ -0.73
PVT1-215	ENST00000522963	SLC24A3	Q9HC58	644 aa		10.46	□□□□□ -0.73
PVT1-215	ENST00000522963	CLN6	Q9NWW5	311 aa		10.46	□□□□□ -0.73
PVT1-215	ENST00000522963	ELOVL5	Q9NYP7	299 aa		10.46	□□□□□ -0.73
PVT1-215	ENST00000522963	TAS2R16	Q9NYV7	291 aa		10.46	□□□□□ -0.73
PVT1-215	ENST00000522963	H2AFY2	Q9P0M6	372 aa	Predicted RBP	10.46	□□□□□ -0.73
PVT1-215	ENST00000522963	KCNN3	Q9UGI6	736 aa		10.46	□□□□□ -0.73
PVT1-215	ENST00000522963	LRRC42	Q9Y546	428 aa		10.46	□□□□□ -0.73
PVT1-215	ENST00000522963	PCDHGB5	Q9Y5G0	923 aa		10.46	□□□□□ -0.73
PVT1-215	ENST00000522963	PRR14L	Q5THK1	2151 aa		10.46	□□□□□ -0.74
PVT1-215	ENST00000522963	ABCA4	P78363	2273 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	SH3D21	A4FU49	640 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	TVP23A	A6NH52	213 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	ZNF99	A8MXY4	864 aa	Predicted RBP	10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	C16orf97	H3BN30	126 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	CASK	O14936	926 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	PRODH	O43272	600 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	LYZL6	O75951	148 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	MPZL1	O95297	269 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	TF	P02787	698 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	GAA	P10253	952 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	LAP3	P28838	519 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	HTR1F	P30939	366 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	FMO3	P31513	532 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	CDH11	P55287	796 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	RPS7	P62081	194 aa	Known RBP	10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	SORD	Q00796	357 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	P2RY6	Q15077	328 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	TSC22D1	Q15714	1073 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	SMN1	Q16637	294 aa	Known RBP	10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	SLC35D3	Q5M8T2	416 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	STAC2	Q6ZMT1	411 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	ZNF627	Q7L945	461 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	GID4	Q8IVV7	300 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	ZNF511	Q8NB15	262 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	OR1K1	Q8NGR3	316 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	OR6K6	Q8NGW6	343 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	FAM222B	Q8WU58	562 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	NABP1	Q96AH0	204 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	ZMYND19	Q96E35	227 aa	Predicted RBP	10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	TEAD3	Q99594	435 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	MED18	Q9BUE0	208 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	NELFA	Q9H3P2	528 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	SEC61A2	Q9H9S3	476 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	POLE4	Q9NR33	117 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	TMEM38B	Q9NVV0	291 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	MRPL22	Q9NWU5	206 aa	Known RBP	10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	NDRG3	Q9UGV2	375 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	MOK	Q9UQ07	419 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	ABCA12	Q86UK0	2595 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963	AKAP6	Q13023	2319 aa		10.45	□□□□□ -0.74
PVT1-215	ENST00000522963		A0A096LPE4	126 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963		A0A1W2PPZ6	126 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	SLC22A31	A6NKX4	558 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	EPX	P11678	715 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	B4GALT1	P15291	398 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	GSTT1	P30711	240 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	UGT2B10	P36537	528 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	NUDT6	P53370	316 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	SH3BGR	P55822	239 aa	Predicted RBP	10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	KRTAP10-9	P60411	292 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	MRPS34	P82930	218 aa	Known RBP	10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	TEK	Q02763	1124 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	HSF2	Q03933	536 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	GLO1	Q04760	184 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	GABRA6	Q16445	453 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	SGCA	Q16586	387 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	MEP1B	Q16820	701 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	SFRP5	Q5T4F7	317 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	KLHL24	Q6TFL4	600 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	UGT2A3	Q6UWM9	527 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	ZNF813	Q6ZN06	617 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	SLC22A24	Q8N4F4	322 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	SLC26A10	Q8NG04	563 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	C11orf40	Q8WZ69	217 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	BCL2L2	Q92843	193 aa	Predicted RBP	10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	C14orf79	Q96F83	325 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963		Q96MT0	163 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	WFIKKN1	Q96NZ8	548 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	AMBN	Q9NP70	447 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	EMC7	Q9NPA0	242 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	UBAP1	Q9NZ09	502 aa		10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	WARS2	Q9UGM6	360 aa	Known RBP	10.44	□□□□□ -0.74
PVT1-215	ENST00000522963	CIB4	A0PJX0	185 aa		10.43	□□□□□ -0.74
PVT1-215	ENST00000522963	RAD51D	O75771	328 aa		10.43	□□□□□ -0.74
PVT1-215	ENST00000522963	HLA-DQA2	P01906	255 aa		10.43	□□□□□ -0.74
PVT1-215	ENST00000522963	PSKH1	P11801	424 aa		10.43	□□□□□ -0.74
PVT1-215	ENST00000522963	NPR2	P20594	1047 aa		10.43	□□□□□ -0.74
PVT1-215	ENST00000522963	PSMB1	P20618	241 aa	Known RBP	10.43	□□□□□ -0.74
PVT1-215	ENST00000522963	MSR1	P21757	451 aa		10.43	□□□□□ -0.74
PVT1-215	ENST00000522963	IL32	P24001	234 aa		10.43	□□□□□ -0.74
PVT1-215	ENST00000522963	CCKAR	P32238	428 aa		10.43	□□□□□ -0.74
PVT1-215	ENST00000522963	GUCA1A	P43080	201 aa	Predicted RBP	10.43	□□□□□ -0.74
PVT1-215	ENST00000522963	BLVRA	P53004	296 aa		10.43	□□□□□ -0.74
PVT1-215	ENST00000522963	TGFBR3	Q03167	851 aa		10.43	□□□□□ -0.74
PVT1-215	ENST00000522963	ZNF91	Q05481	1191 aa		10.43	□□□□□ -0.74
PVT1-215	ENST00000522963	ENDOG	Q14249	297 aa	Known RBP	10.43	□□□□□ -0.74
PVT1-215	ENST00000522963	KCNMB1	Q16558	191 aa		10.43	□□□□□ -0.74
PVT1-215	ENST00000522963	HIKESHI	Q53FT3	197 aa		10.43	□□□□□ -0.74

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