RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 NRN1LQ496H8 165 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 TEX30Q5JUR7 227 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 TMEM154Q6P9G4 183 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 LYPD4Q6UWN0 246 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 TFAP2EQ6VUC0 442 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 CDC20BQ86Y33 519 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 ERI1Q8IV48 349 aaKnown RBP11.52□□□□□ -0.57
CPNE3-205ENST00000522240 ZNF100Q8IYN0 542 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 GCNT2Q8N0V5 402 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 OR10H5Q8NGA6 315 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 OR6N2Q8NGY6 317 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 OR2T27Q8NH04 317 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 NSMAFQ92636 917 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 MRPL48Q96GC5 212 aaKnown RBP11.52□□□□□ -0.57
CPNE3-205ENST00000522240 DOCK7Q96N67 2140 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 MYCBPQ99417 103 aaPredicted RBP11.52□□□□□ -0.57
CPNE3-205ENST00000522240 NELFAQ9H3P2 528 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 WDR76Q9H967 626 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 GPR35Q9HC97 309 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 POLE4Q9NR33 117 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 SLC7A10Q9NS82 523 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 CHCHD3Q9NX63 227 aaKnown RBP11.52□□□□□ -0.57
CPNE3-205ENST00000522240 TMEM14AQ9Y6G1 99 aa11.52□□□□□ -0.57
CPNE3-205ENST00000522240 GTF3C1Q12789 2109 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 MED12LQ86YW9 2145 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 SHANK1Q9Y566 2161 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 A0A1W2PPL8 197 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 TVP23AA6NH52 213 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 ZNF587BE7ETH6 402 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 ZNF670-ZNF695F2Z2N8 137 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 PHYHO14832 338 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 MYL12BO14950 172 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 KRT33AO76009 404 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 IL2RAP01589 272 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 ADRA2AP08913 450 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 TMIGD3P0DMS9 266 aaPredicted RBP11.51□□□□□ -0.57
CPNE3-205ENST00000522240 ATP6V1B1P15313 513 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 JUNBP17275 347 aaPredicted RBP11.51□□□□□ -0.57
CPNE3-205ENST00000522240 NPR2P20594 1047 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 PCMT1P22061 227 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 GUCA1AP43080 201 aaPredicted RBP11.51□□□□□ -0.57
CPNE3-205ENST00000522240 KIR2DL2P43627 348 aaPredicted RBP11.51□□□□□ -0.57
CPNE3-205ENST00000522240 SH3BGRP55822 239 aaPredicted RBP11.51□□□□□ -0.57
CPNE3-205ENST00000522240 LSM6P62312 80 aaKnown RBP11.51□□□□□ -0.57
CPNE3-205ENST00000522240 SIRPAP78324 504 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 ADAM8P78325 824 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 ROR2Q01974 943 aaKnown RBP11.51□□□□□ -0.57
CPNE3-205ENST00000522240 BLMHQ13867 455 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 GALEQ14376 348 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 CEACAM16Q2WEN9 425 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 LINGO2Q7L985 606 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 OR10H4Q8NGA5 316 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 OR52N1Q8NH53 320 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 C11orf40Q8WZ69 217 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 TTYH2Q9BSA4 534 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 SFXN3Q9BWM7 321 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 MND1Q9BWT6 205 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 CRLF2Q9HC73 371 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 ACOT13Q9NPJ3 140 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 ERVK13-1Q9NX77 482 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 UPB1Q9UBR1 384 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 ERGIC3Q9Y282 383 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 SVILO95425 2214 aa11.51□□□□□ -0.57
CPNE3-205ENST00000522240 COL12A1Q99715 3063 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 ALPK2Q86TB3 2170 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 DAPL1A0PJW8 107 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 ZNF99A8MXY4 864 aaPredicted RBP11.5□□□□□ -0.57
CPNE3-205ENST00000522240 TNFSF13O75888 250 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 TOXO94900 526 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 GPANK1O95872 356 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 LIMS3P0CW19 117 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 LIMS4P0CW20 117 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 GLI4P10075 376 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 ZNF823P16415 610 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 MSR1P21757 451 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 EDNRAP25101 427 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 CAPZA2P47755 286 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 NR1H2P55055 460 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 CASP6P55212 293 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 ACTA2P62736 377 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 ACTG2P63267 376 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 EMX1Q04741 257 aaPredicted RBP11.5□□□□□ -0.57
CPNE3-205ENST00000522240 UBE2UQ5VVX9 321 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 FBXW9Q5XUX1 488 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 XAF1Q6GPH4 301 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 LIAT1Q6ZQX7 453 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 KCTD8Q6ZWB6 473 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 ZNF627Q7L945 461 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 ZNF367Q7RTV3 350 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.5□□□□□ -0.57
CPNE3-205ENST00000522240 EGFL6Q8IUX8 553 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 RPRMLQ8N4K4 120 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 KLHL36Q8N4N3 616 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 CNEP1R1Q8N9A8 125 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 OTOSQ8NHW6 89 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 NABP1Q96AH0 204 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 FOXB1Q99853 325 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 ZNF649Q9BS31 505 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 C12orf49Q9H741 205 aa11.5□□□□□ -0.57
CPNE3-205ENST00000522240 TMEM38BQ9NVV0 291 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms