RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 ISG20L2Q9H9L3 353 aaKnown RBP12.62□□□□□ -0.39
SYNPO-205ENST00000522122 TUBAL3A6NHL2 446 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 E9PI62 339 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 MRPL33O75394 65 aaKnown RBP12.62□□□□□ -0.39
SYNPO-205ENST00000522122 IFNA10P01566 189 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 POU3F3P20264 500 aaPredicted RBP12.62□□□□□ -0.39
SYNPO-205ENST00000522122 NKX6-1P78426 367 aaPredicted RBP12.62□□□□□ -0.39
SYNPO-205ENST00000522122 PMPCAQ10713 525 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 GLYR1Q49A26 553 aaPredicted RBP12.62□□□□□ -0.39
SYNPO-205ENST00000522122 WDR88Q6ZMY6 472 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 MDGA2Q7Z553 956 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 PAPOLGQ9BWT3 736 aaKnown RBP12.62□□□□□ -0.39
SYNPO-205ENST00000522122 FBXO7Q9Y3I1 522 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 ARPC4-TTLL3A0A0A6YYG9 625 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 TMEM200CA6NKL6 621 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 FFAR1O14842 300 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 PPM1DO15297 605 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 SLC34A2O95436 690 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 C1QCP02747 245 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 LPLP06858 475 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 ZNF136P52737 540 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 RAB31Q13636 194 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 LPCAT3Q6P1A2 487 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 SIRT6Q8N6T7 355 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 AGBL5Q8NDL9 886 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 OR5L1Q8NGL2 311 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 OR13C5Q8NGS8 318 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 PLEKHA3Q9HB20 300 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 CYSLTR2Q9NS75 346 aa12.62□□□□□ -0.39
SYNPO-205ENST00000522122 LSM2Q9Y333 95 aaKnown RBP12.62□□□□□ -0.39
SYNPO-205ENST00000522122 PRAMEF4O60810 478 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 M6PRP20645 277 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 DPP4P27487 766 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 EIF1P41567 113 aaKnown RBP12.61□□□□□ -0.39
SYNPO-205ENST00000522122 TOR2AQ5JU69 321 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 NKAIN2Q5VXU1 208 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 TMUB2Q71RG4 321 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 KANSL1Q7Z3B3 1105 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 CPT1CQ8TCG5 803 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 PSMF1Q92530 271 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 TMEM68Q96MH6 324 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 IFITM5A6NNB3 132 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 MYOGP15173 224 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 ACHEP22303 614 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 MAP2K6P52564 334 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 EMC4Q5J8M3 183 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 LHX8Q68G74 356 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 FAM122CQ6P4D5 195 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 SLC22A25Q6T423 547 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 TEX261Q6UWH6 196 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 ZNF680Q8NEM1 530 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 OR4Q3Q8NH05 313 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 UPRTQ96BW1 309 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 OR51B6Q9H340 312 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 SCPEP1Q9HB40 452 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 TBX21Q9UL17 535 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 U3KQ87 197 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 ITGB2P05107 769 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 ERVK-16P61578 105 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 EBPQ15125 230 aaKnown RBP12.61□□□□□ -0.39
SYNPO-205ENST00000522122 GLIPR1L1Q6UWM5 242 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 ARIH2OSQ8N7S6 290 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 BCORP1Q8N888 145 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 ZNF681Q96N22 645 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 MARVELD1Q9BSK0 173 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 ANKRD61A6NGH8 418 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 TNFSF12O43508 249 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 HRO43593 1189 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 SIGLEC6O43699 453 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 EIF1BO60739 113 aaKnown RBP12.61□□□□□ -0.39
SYNPO-205ENST00000522122 LIMS3P0CW19 117 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 LIMS4P0CW20 117 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 IRF2P14316 349 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 ST6GAL1P15907 406 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 IAH1Q2TAA2 248 aaPredicted RBP12.61□□□□□ -0.39
SYNPO-205ENST00000522122 ZNF684Q5T5D7 378 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 CMTM4Q8IZR5 234 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 SLC23A1Q9UHI7 598 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 ACAD8Q9UKU7 415 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 TMEM184BQ9Y519 407 aaPredicted RBP12.61□□□□□ -0.39
SYNPO-205ENST00000522122 ARID1AO14497 2285 aa12.61□□□□□ -0.39
SYNPO-205ENST00000522122 PMP2P02689 132 aa12.6□□□□□ -0.39
SYNPO-205ENST00000522122 APEHP13798 732 aaKnown RBP12.6□□□□□ -0.39
SYNPO-205ENST00000522122 P2RX1P51575 399 aa12.6□□□□□ -0.39
SYNPO-205ENST00000522122 SIGIRRQ6IA17 410 aa12.6□□□□□ -0.39
SYNPO-205ENST00000522122 CCL4L1Q8NHW4 92 aa12.6□□□□□ -0.39
SYNPO-205ENST00000522122 OR6C1Q96RD1 312 aa12.6□□□□□ -0.39
SYNPO-205ENST00000522122 TP53TG5Q9Y2B4 290 aa12.6□□□□□ -0.39
SYNPO-205ENST00000522122 BET1O15155 118 aa12.6□□□□□ -0.39
SYNPO-205ENST00000522122 NSA2O95478 260 aaKnown RBP12.6□□□□□ -0.39
SYNPO-205ENST00000522122 CEACAM5P06731 702 aa12.6□□□□□ -0.39
SYNPO-205ENST00000522122 NME2P22392 152 aa12.6□□□□□ -0.39
SYNPO-205ENST00000522122 MMP15P51511 669 aa12.6□□□□□ -0.39
SYNPO-205ENST00000522122 TMEM81Q6P7N7 255 aa12.6□□□□□ -0.39
SYNPO-205ENST00000522122 ELSPBP1Q96BH3 223 aa12.6□□□□□ -0.39
SYNPO-205ENST00000522122 ZNF764Q96H86 408 aaPredicted RBP12.6□□□□□ -0.39
SYNPO-205ENST00000522122 SLC19A3Q9BZV2 496 aa12.6□□□□□ -0.39
SYNPO-205ENST00000522122 TDRD15B5MCY1 1934 aaKnown RBP12.6□□□□□ -0.39
SYNPO-205ENST00000522122 POLR2AP24928 1970 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms