RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 MRI1Q9BV20 369 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 DPCDQ9BVM2 203 aaPredicted RBP9.16□□□□□ -0.94
MCF2-209ENST00000520602 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.16□□□□□ -0.94
MCF2-209ENST00000520602 IRF2BPLQ9H1B7 796 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 ZNF768Q9H5H4 540 aaKnown RBP9.16□□□□□ -0.94
MCF2-209ENST00000520602 PPP1R3EQ9H7J1 279 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 PLEK2Q9NYT0 353 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 MYOTQ9UBF9 498 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 ST6GALNAC2Q9UJ37 374 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 SCP2D1Q9UJQ7 156 aa9.16□□□□□ -0.94
MCF2-209ENST00000520602 NOP16Q9Y3C1 178 aaKnown RBP9.16□□□□□ -0.94
MCF2-209ENST00000520602 ZNF106Q9H2Y7 1883 aaKnown RBP9.16□□□□□ -0.94
MCF2-209ENST00000520602 LYPD3O95274 346 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 RAB3DO95716 219 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 SSTR2P30874 369 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 CASRP41180 1078 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 HTR2BP41595 481 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 EGR3Q06889 387 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 ATXN7L3Q14CW9 347 aaPredicted RBP9.15□□□□□ -0.94
MCF2-209ENST00000520602 C3orf33Q6P1S2 294 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 FAM57BQ71RH2 274 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 GLB1L2Q8IW92 636 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 ZNF454Q8N9F8 522 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 UPRTQ96BW1 309 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 SPACA5Q96QH8 159 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 SNX18Q96RF0 628 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 RANBP3Q9H6Z4 567 aaPredicted RBP9.15□□□□□ -0.94
MCF2-209ENST00000520602 SLC22A11Q9NSA0 550 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 FRRS1LQ9P0K9 344 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 STEAP1Q9UHE8 339 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 IGHV5-10-1A0A0J9YXX1 117 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 TIAF1O95411 115 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 ITGA3P26006 1051 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 ZNF84P51523 738 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 MYBPHQ13203 477 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 ALKBH2Q6NS38 261 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 CD163Q86VB7 1156 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 FTMTQ8N4E7 242 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 PLPP5Q8NEB5 264 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 PNPLA2Q96AD5 504 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 GNRHR2Q96P88 292 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 OR8B4Q96RC9 309 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 POTEKPQ9BYX7 375 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 ABI3Q9P2A4 366 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 ASH2LQ9UBL3 628 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 FANCMQ8IYD8 2048 aa9.15□□□□□ -0.94
MCF2-209ENST00000520602 NUP210Q8TEM1 1887 aaPredicted RBP9.15□□□□□ -0.94
MCF2-209ENST00000520602 A0A0A6YYJ9 748 aa9.15□□□□□ -0.95
MCF2-209ENST00000520602 IGHV3-15A0A0B4J1V0 119 aa9.15□□□□□ -0.95
MCF2-209ENST00000520602 LOC107986453A0A1B0GWG9 222 aa9.15□□□□□ -0.95
MCF2-209ENST00000520602 L7N2F9 121 aa9.15□□□□□ -0.95
MCF2-209ENST00000520602 ZNF28P17035 718 aa9.15□□□□□ -0.95
MCF2-209ENST00000520602 CDAP32320 146 aa9.15□□□□□ -0.95
MCF2-209ENST00000520602 CLDN20P56880 219 aa9.15□□□□□ -0.95
MCF2-209ENST00000520602 EGR4Q05215 589 aa9.15□□□□□ -0.95
MCF2-209ENST00000520602 FAPQ12884 760 aa9.15□□□□□ -0.95
MCF2-209ENST00000520602 INPP5JQ15735 1006 aaPredicted RBP9.15□□□□□ -0.95
MCF2-209ENST00000520602 DCAF12Q5T6F0 453 aa9.15□□□□□ -0.95
MCF2-209ENST00000520602 COX15Q7KZN9 410 aa9.15□□□□□ -0.95
MCF2-209ENST00000520602 KCTD9Q7L273 389 aa9.15□□□□□ -0.95
MCF2-209ENST00000520602 CARFQ8N187 725 aa9.15□□□□□ -0.95
MCF2-209ENST00000520602 OR51A4Q8NGJ6 313 aa9.15□□□□□ -0.95
MCF2-209ENST00000520602 OR5D18Q8NGL1 313 aa9.15□□□□□ -0.95
MCF2-209ENST00000520602 STK35Q8TDR2 534 aa9.15□□□□□ -0.95
MCF2-209ENST00000520602 DNASE2BQ8WZ79 361 aa9.15□□□□□ -0.95
MCF2-209ENST00000520602 SLC6A7Q99884 636 aa9.15□□□□□ -0.95
MCF2-209ENST00000520602 SEC22CQ9BRL7 303 aa9.15□□□□□ -0.95
MCF2-209ENST00000520602 METTL17Q9H7H0 456 aaPredicted RBP9.15□□□□□ -0.95
MCF2-209ENST00000520602 TAS2R8Q9NYW2 309 aa9.15□□□□□ -0.95
MCF2-209ENST00000520602 NXT1Q9UKK6 140 aaKnown RBP9.15□□□□□ -0.95
MCF2-209ENST00000520602 A0A1B0GTQ1 180 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 SLC22A23A1A5C7 686 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 ANKUB1A6NFN9 424 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 E9PQ18 207 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 PLPP3O14495 311 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 PEX14O75381 377 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 MSX1P28360 303 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 DCTDP32321 178 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 TAS2R20P59543 309 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 SLC22A6Q4U2R8 563 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 RNASE10Q5GAN6 216 aaKnown RBP9.14□□□□□ -0.95
MCF2-209ENST00000520602 PRSS42Q7Z5A4 293 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 OR5D14Q8NGL3 314 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 OR52N5Q8NH56 324 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 CCDC107Q8WV48 283 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 SPACA9Q96E40 222 aaPredicted RBP9.14□□□□□ -0.95
MCF2-209ENST00000520602 PGLYRP3Q96LB9 341 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 RTN4RQ9BZR6 473 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 FBXL3Q9UKT7 428 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 PLEKHA6Q9Y2H5 1048 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 FITM1A5D6W6 292 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 IGKV3-11P04433 115 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 ASAH2BP0C7U1 165 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 RAB3AP20336 220 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 IL11P20809 199 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 ACTBP60709 375 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 ACTG1P63261 375 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 CFHR1Q03591 330 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 HACD4Q5VWC8 232 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 TMEM205Q6UW68 189 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms