RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 LRRC18Q8N456 261 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 RNF148Q8N7C7 305 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 ANKS4BQ8N8V4 417 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 FAM156AQ8NDB6 213 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 RBM15BQ8NDT2 890 aaKnown RBP8.05□□□□□ -1.12
HDAC3-215ENST00000519474 SLC7A13Q8TCU3 470 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 GEMIN6Q8WXD5 167 aaKnown RBP8.05□□□□□ -1.12
HDAC3-215ENST00000519474 ACOT11Q8WXI4 607 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-215ENST00000519474 FAM162AQ96A26 154 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 HSH2DQ96JZ2 352 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 CDRT15Q96T59 188 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 MRPL37Q9BZE1 423 aaKnown RBP8.05□□□□□ -1.12
HDAC3-215ENST00000519474 GORASP2Q9H8Y8 452 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 RNF121Q9H920 327 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 SIAEQ9HAT2 523 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 SCPEP1Q9HB40 452 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 VCX3AQ9NNX9 186 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 ADA2Q9NZK5 511 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 NDUFAF4Q9P032 175 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 TMEM5Q9Y2B1 443 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 CMAHPQ9Y471 501 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 UGT2A1Q9Y4X1 527 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 MTORP42345 2549 aa8.05□□□□□ -1.12
HDAC3-215ENST00000519474 MAP1AP78559 2803 aaPredicted RBP8.04□□□□□ -1.12
HDAC3-215ENST00000519474 FN1P02751 2386 aaKnown RBP8.04□□□□□ -1.12
HDAC3-215ENST00000519474 TRAV27A0A087WT01 109 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 EFCAB9A8MZ26 197 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 MCIDASD6RGH6 385 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 CRLF1O75462 422 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 SLC2A10O95528 541 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 RAB36O95755 333 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 SCG5P05408 212 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 ADRA2AP08913 450 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 MMP7P09237 267 aaPredicted RBP8.04□□□□□ -1.12
HDAC3-215ENST00000519474 CCL2P13500 99 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 SLC25A16P16260 332 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 CTRB1P17538 263 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 RHCEP18577 417 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 M6PRP20645 277 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 PRKACBP22694 351 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 RAD52P43351 418 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 PPOXP50336 477 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 PDLIM4P50479 330 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 DAP3P51398 398 aaKnown RBP8.04□□□□□ -1.12
HDAC3-215ENST00000519474 ZNF84P51523 738 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 SNRPD2P62316 118 aaKnown RBP8.04□□□□□ -1.12
HDAC3-215ENST00000519474 MRPS34P82930 218 aaKnown RBP8.04□□□□□ -1.12
HDAC3-215ENST00000519474 FMODQ06828 376 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 SNTB2Q13425 540 aaKnown RBP8.04□□□□□ -1.12
HDAC3-215ENST00000519474 SGCAQ16586 387 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 ZBED5Q49AG3 693 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 THEM4Q5T1C6 240 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 FAM27BQ5VT28 67 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 CTRB2Q6GPI1 263 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 ZNF730Q6ZMV8 503 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 DPPA2Q7Z7J5 298 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 SLC51BQ86UW2 128 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 IGFN1Q86VF2 1251 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 CDK20Q8IZL9 346 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 SVOPLQ8N434 492 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 PAQR4Q8N4S7 273 aaPredicted RBP8.04□□□□□ -1.12
HDAC3-215ENST00000519474 FAM86B1Q8N7N1 296 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 CLDN22Q8N7P3 220 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 ARIH2OSQ8N7S6 290 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 CPEB3Q8NE35 698 aaKnown RBP8.04□□□□□ -1.12
HDAC3-215ENST00000519474 NOXO1Q8NFA2 376 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 NSMAFQ92636 917 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 MRPL24Q96A35 216 aaKnown RBP8.04□□□□□ -1.12
HDAC3-215ENST00000519474 NABP1Q96AH0 204 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 PYURFQ96I23 114 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 RBP7Q96R05 134 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 FUZQ9BT04 418 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 RAB1BQ9H0U4 201 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 WNT5BQ9H1J7 359 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 YAE1D1Q9NRH1 226 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 RPS6KA6Q9UK32 745 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 ARL2BPQ9Y2Y0 163 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 SPEF1Q9Y4P9 236 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 ABCA1O95477 2261 aa8.04□□□□□ -1.12
HDAC3-215ENST00000519474 FLNAP21333 2647 aaKnown RBP8.03□□□□□ -1.12
HDAC3-215ENST00000519474 LOC390937A0A1W2PQ73 354 aa8.03□□□□□ -1.12
HDAC3-215ENST00000519474 LYNX1G3V0Z9 82 aa8.03□□□□□ -1.12
HDAC3-215ENST00000519474 TLX2O43763 284 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-215ENST00000519474 ENTPD5O75356 428 aa8.03□□□□□ -1.12
HDAC3-215ENST00000519474 DIRAS1O95057 198 aa8.03□□□□□ -1.12
HDAC3-215ENST00000519474 FARS2O95363 451 aaKnown RBP8.03□□□□□ -1.12
HDAC3-215ENST00000519474 IGHMP01871 453 aa8.03□□□□□ -1.12
HDAC3-215ENST00000519474 LYNX1P0DP58 116 aa8.03□□□□□ -1.12
HDAC3-215ENST00000519474 SAGP10523 405 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-215ENST00000519474 HSD17B1P14061 328 aa8.03□□□□□ -1.12
HDAC3-215ENST00000519474 TCN1P20061 433 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-215ENST00000519474 USF1P22415 310 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-215ENST00000519474 COL8A2P25067 703 aa8.03□□□□□ -1.12
HDAC3-215ENST00000519474 NOS3P29474 1203 aa8.03□□□□□ -1.12
HDAC3-215ENST00000519474 NR4A2P43354 598 aa8.03□□□□□ -1.12
HDAC3-215ENST00000519474 OMPP47874 163 aa8.03□□□□□ -1.12
HDAC3-215ENST00000519474 SLC9A3P48764 834 aa8.03□□□□□ -1.12
HDAC3-215ENST00000519474 UCP2P55851 309 aa8.03□□□□□ -1.12
HDAC3-215ENST00000519474 ERVK-25P63136 954 aa8.03□□□□□ -1.12
HDAC3-215ENST00000519474 VLDLRP98155 873 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms