RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 SP140LQ9H930 580 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 FOLH1BQ9HBA9 442 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 HMG20AQ9NP66 347 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 POLE4Q9NR33 117 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 UBQLN4Q9NRR5 601 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 EXD2Q9NVH0 621 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 GPATCH2Q9NW75 528 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 ASB6Q9NWX5 421 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 VNN3Q9NY84 501 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 FBLN5Q9UBX5 448 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 GIMAP2Q9UG22 337 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 OSGIN1Q9UJX0 560 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 BOKQ9UMX3 212 aaPredicted RBP2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 CORO2BQ9UQ03 480 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 ERVK-19Q9WJR5 959 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 NDUFAF1Q9Y375 327 aa2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 CHCHD2Q9Y6H1 151 aaPredicted RBP2.64□□□□□ -1.99
SCARNA13-201ENST00000516672 A0A087WZY1 265 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 A0A096LPI6 279 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 A0A1W2PS29 197 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 ISPDA4D126 451 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 FAM172BPA6NC97 362 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 CCDC154A6NI56 674 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 ZNF99A8MXY4 864 aaPredicted RBP2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 EVPLLA8MZ36 301 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 ALG1L2C9J202 215 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 C9JVG2 144 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 NPIPB9F8W1W9 429 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 M0QX08 132 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 WWP2O00308 870 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 ETV2O00321 342 aaPredicted RBP2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 HCRTR2O43614 444 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 FADS1O60427 444 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 TPST1O60507 370 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 EIF4E2O60573 245 aaKnown RBP2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 NOL3O60936 208 aaKnown RBP2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 STX11O75558 287 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 UPK1BO75841 260 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 TRAPPC6AO75865 159 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 LRATO95237 230 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 C6orf47O95873 294 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 ACTL6AO96019 429 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 HPXP02790 462 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 MT-ND1P03886 318 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 MT-ND2P03891 347 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 HPNP05981 417 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 UMPSP11172 480 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 NCK1P16333 377 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 HOXB9P17482 250 aaPredicted RBP2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 GPX2P18283 190 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 IL12AP29459 219 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 IL12BP29460 328 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 GABRA5P31644 462 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 APOBEC3AP31941 199 aaPredicted RBP2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 GABRA3P34903 492 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 GRK5P34947 590 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 ETV6P41212 452 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 ECI1P42126 302 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 MAP2K4P45985 399 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 GPR6P46095 362 aaPredicted RBP2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 EFNB2P52799 333 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 ATP12AP54707 1039 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 XGP55808 180 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 SUMO3P55854 103 aaPredicted RBP2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 ARPC4P59998 168 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 ISL1P61371 349 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 UFM1P61960 85 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 NCS1P62166 190 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 POU6F2P78424 691 aaPredicted RBP2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 GALK2Q01415 458 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 CHRNEQ04844 493 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 SRYQ05066 204 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 LIPEQ05469 1076 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 DUSP2Q05923 314 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 SPOCK1Q08629 439 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 RBBP4Q09028 425 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 C17orf67Q0P5P2 114 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 PLCXD2Q0VAA5 305 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 HSPB3Q12988 150 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 FADDQ13158 208 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 FGFBP1Q14512 234 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 GANABQ14697 944 aaKnown RBP2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 EXOSC7Q15024 291 aaKnown RBP2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 GUSBP1Q15486 140 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 LTB4RQ15722 352 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 MAPK11Q15759 364 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 ZNF141Q15928 474 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 ARHGAP11BQ3KRB8 267 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 ZIK1Q3SY52 487 aaPredicted RBP2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 SPDYE7PQ495Y7 208 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 KLHL26Q53HC5 615 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 ZNF385BQ569K4 471 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 Q5BKY6 102 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 RABL3Q5HYI8 236 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 PAGE3Q5JUK9 113 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 SPANXN4Q5MJ08 99 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 ATAD3CQ5T2N8 411 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 SYT6Q5T7P8 510 aaPredicted RBP2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 STEAP3Q658P3 488 aa2.63□□□□□ -1.99
SCARNA13-201ENST00000516672 TIGD3Q6B0B8 471 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms