RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 PRR3P79522 188 aaKnown RBP-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 MRPS6P82932 125 aaKnown RBP-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 SLC15A2Q16348 729 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 PYCR3Q53H96 274 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 ELP2Q6IA86 826 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 CWC27Q6UX04 472 aaKnown RBP-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 ASPGQ86U10 573 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 AQP12AQ8IXF9 295 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 EID2Q8N6I1 236 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 ZFP62Q8NB50 900 aaPredicted RBP-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 OR52N1Q8NH53 320 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 RPL3LQ92901 407 aaKnown RBP-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 FAM120BQ96EK7 910 aaKnown RBP-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 UBE2E2Q96LR5 201 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 GPR22Q99680 433 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 GPA33Q99795 319 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 BAG1Q99933 345 aaPredicted RBP-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 ALG12Q9BV10 488 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 ACTR6Q9GZN1 396 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 COMMD4Q9H0A8 199 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 NEUROG2Q9H2A3 272 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 PACSIN2Q9UNF0 486 aaPredicted RBP-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 CLSPNQ9HAW4 1339 aa-2.52□□□□□ -2.81
RNU6-539P-201ENST00000516665 WNK1Q9H4A3 2382 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 TRBC2A0A5B9 178 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 C5orf52A6NGY3 159 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 E7EWF7 191 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 F5H5T6 163 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 PAHP00439 452 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 RPN2P04844 631 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 PDHBP11177 359 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 CYP2B6P20813 491 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 RFC4P35249 363 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 TDO2P48775 406 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 CCR8P51685 355 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 RPS14P62263 151 aaKnown RBP-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 CDO1Q16878 200 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 AVPI1Q5T686 147 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 OR2G6Q5TZ20 316 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 METTL21CQ5VZV1 264 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 ATL3Q6DD88 541 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 PODNL1Q6PEZ8 512 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 HDDC2Q7Z4H3 204 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 MOB3BQ86TA1 216 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 SCFD1Q8WVM8 642 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 SLC35G5Q96KT7 338 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 AMELYQ99218 206 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 MLPHQ9BV36 600 aaPredicted RBP-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 TBC1D10AQ9BXI6 508 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 CRNKL1Q9BZJ0 848 aaKnown RBP-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 RHBDL2Q9NX52 303 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 ENTPD4Q9Y227 616 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 STK38LQ9Y2H1 464 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 CRYL1Q9Y2S2 319 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 LRRC42Q9Y546 428 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 SLC22A7Q9Y694 548 aa-2.53□□□□□ -2.81
RNU6-539P-201ENST00000516665 GLI3P10071 1580 aa-2.53□□□□□ -2.82
RNU6-539P-201ENST00000516665 ANKRD30BLA7E2S9 258 aa-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 HIDE1A8MVS5 230 aa-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 GPR89AB7ZAQ6 455 aa-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 ARPC1BO15143 372 aaKnown RBP-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 GPR89BP0CG08 455 aa-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 RBM3P98179 157 aaKnown RBP-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 BDH1Q02338 343 aa-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 ZNF266Q14584 549 aa-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 DPYSL2Q16555 572 aa-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 Q6ZPB1 254 aaPredicted RBP-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 P4HA3Q7Z4N8 544 aa-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 AMZ2Q86W34 360 aa-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 RPRMLQ8N4K4 120 aa-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 OR4M1Q8NGD0 313 aa-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 OR4D6Q8NGJ1 314 aa-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 LKAAEAR1Q8TD35 194 aa-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 YIPF5Q969M3 257 aa-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 BSCL2Q96G97 398 aaPredicted RBP-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 PDE7BQ9NP56 450 aa-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 ABCB9Q9NP78 766 aa-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 INIPQ9NRY2 104 aa-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 KCNIP1Q9NZI2 227 aa-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 MRPL15Q9P015 296 aaKnown RBP-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 SH3BGRL2Q9UJC5 107 aa-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 YLPM1P49750 1951 aaKnown RBP-2.54□□□□□ -2.82
RNU6-539P-201ENST00000516665 KRBOX1C9JBD0 128 aa-2.55□□□□□ -2.82
RNU6-539P-201ENST00000516665 E7ESA3 106 aa-2.55□□□□□ -2.82
RNU6-539P-201ENST00000516665 CDH16O75309 829 aa-2.55□□□□□ -2.82
RNU6-539P-201ENST00000516665 SIX3O95343 332 aaPredicted RBP-2.55□□□□□ -2.82
RNU6-539P-201ENST00000516665 PGM3O95394 542 aa-2.55□□□□□ -2.82
RNU6-539P-201ENST00000516665 KRT8P05787 483 aa-2.55□□□□□ -2.82
RNU6-539P-201ENST00000516665 HIST1H2AGP0C0S8 130 aaPredicted RBP-2.55□□□□□ -2.82
RNU6-539P-201ENST00000516665 RPA2P15927 270 aa-2.55□□□□□ -2.82
RNU6-539P-201ENST00000516665 PAX6P26367 422 aa-2.55□□□□□ -2.82
RNU6-539P-201ENST00000516665 ATXN3P54252 364 aaPredicted RBP-2.55□□□□□ -2.82
RNU6-539P-201ENST00000516665 TAS2R43P59537 309 aa-2.55□□□□□ -2.82
RNU6-539P-201ENST00000516665 SRYQ05066 204 aa-2.55□□□□□ -2.82
RNU6-539P-201ENST00000516665 RGS1Q08116 209 aa-2.55□□□□□ -2.82
RNU6-539P-201ENST00000516665 ILKQ13418 452 aa-2.55□□□□□ -2.82
RNU6-539P-201ENST00000516665 KRT32Q14532 448 aa-2.55□□□□□ -2.82
RNU6-539P-201ENST00000516665 PRPSAP1Q14558 356 aa-2.55□□□□□ -2.82
RNU6-539P-201ENST00000516665 ITPR3Q14573 2671 aa-2.55□□□□□ -2.82
RNU6-539P-201ENST00000516665 CRY2Q49AN0 593 aa-2.55□□□□□ -2.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms